Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 RNU6-170P-201ENST00000362832 104 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 AL023284.1-201ENST00000403956 276 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 AC004941.2-201ENST00000427009 228 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 AC099513.1-201ENST00000490423 301 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 RNU6-521P-201ENST00000516663 105 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 AL590808.1-201ENST00000618696 141 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNU4-82P-201ENST00000362443 140 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNU6-457P-201ENST00000363999 107 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 Y_RNA.377-201ENST00000365644 108 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 Y_RNA.659-201ENST00000515994 113 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNU6-859P-201ENST00000362728 107 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 SNORA32-201ENST00000384072 121 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 RNU6-679P-201ENST00000391003 106 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 MRPL35P3-201ENST00000421557 364 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 RNU7-61P-201ENST00000515897 61 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 RNU6-795P-201ENST00000516323 103 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 MIR512-1-201ENST00000384913 84 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 RNU6-322P-201ENST00000516010 103 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 RN7SKP12-201ENST00000516275 143 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 AC062037.1-201ENST00000605302 128 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 AC012531.4-201ENST00000616509 177 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 MIR520C-201ENST00000385005 87 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 RNU6-644P-201ENST00000391155 98 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 RNA5SP100-201ENST00000410903 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 RNA5SP59-201ENST00000410922 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 AC245047.7-201ENST00000440265 293 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 SNORD14A-201ENST00000606526 91 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 MIR8055-201ENST00000610739 97 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 RNU6-60P-201ENST00000364792 103 ntBASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 RNA5SP57-201ENST00000459463 123 ntBASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 AC003982.1-202ENST00000469928 248 ntBASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 MIR3945-201ENST00000581853 98 ntBASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 SNORD115-35-201ENST00000365122 82 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 RNU6-1201P-201ENST00000384227 107 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 MIR196B-201ENST00000384852 84 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 Y_RNA.705-201ENST00000516862 110 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 MIR4764-201ENST00000580680 88 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 MIR4439-201ENST00000583746 80 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 U7.3-201ENST00000616123 62 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 AC008133.2-201ENST00000624540 351 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 AC005336.3-201ENST00000623833 2679 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 RNU6-1313P-201ENST00000362622 102 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 Y_RNA.95-201ENST00000363079 95 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 RNA5SP173-201ENST00000364857 136 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 Y_RNA.290-201ENST00000364879 114 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 SNORA67.4-201ENST00000384688 142 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 RNU6-972P-201ENST00000391208 107 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 RNA5SP450-201ENST00000411206 102 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 SNORA31.17-201ENST00000516953 127 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 CYP3A52P-201ENST00000563326 91 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 IGLL4P-201ENST00000614590 133 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 HMGN1P33-201ENST00000432945 451 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 AC108729.3-201ENST00000513484 108 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 RNU7-2P-201ENST00000516096 62 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 SNORA31.25-201ENST00000517242 134 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 DEFB122-202ENST00000569013 197 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 MIR26A1-201ENST00000362205 77 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 RNU1-52P-201ENST00000384190 164 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 HMGN2P35-201ENST00000412164 270 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 RNU6-162P-201ENST00000516228 103 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 AP003327.1-201ENST00000529684 127 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 MIR6817-201ENST00000615588 66 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms