Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PHTF2Q8N3S3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 RNU6-170P-201ENST00000362832 104 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 AL023284.1-201ENST00000403956 276 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 AC004941.2-201ENST00000427009 228 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 AC099513.1-201ENST00000490423 301 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 RNU6-521P-201ENST00000516663 105 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 AL590808.1-201ENST00000618696 141 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.84□□□□□ -1.95
PHTF2Q8N3S3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNU4-82P-201ENST00000362443 140 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNU6-457P-201ENST00000363999 107 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 Y_RNA.377-201ENST00000365644 108 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNA5SP492-201ENST00000411330 114 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 Y_RNA.659-201ENST00000515994 113 ntBASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
PHTF2Q8N3S3 RNU6-859P-201ENST00000362728 107 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 SNORA32-201ENST00000384072 121 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 RNU6-679P-201ENST00000391003 106 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 MRPL35P3-201ENST00000421557 364 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 RNU7-61P-201ENST00000515897 61 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 RNU6-795P-201ENST00000516323 103 ntBASIC2.82□□□□□ -1.96
PHTF2Q8N3S3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 MIR512-1-201ENST00000384913 84 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 RNU6-322P-201ENST00000516010 103 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 RN7SKP12-201ENST00000516275 143 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 AC062037.1-201ENST00000605302 128 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 AC012531.4-201ENST00000616509 177 ntBASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
PHTF2Q8N3S3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 MIR520C-201ENST00000385005 87 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 RNU6-644P-201ENST00000391155 98 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 RNA5SP100-201ENST00000410903 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 RNA5SP59-201ENST00000410922 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 AC245047.7-201ENST00000440265 293 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 SNORD14A-201ENST00000606526 91 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 MIR8055-201ENST00000610739 97 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
PHTF2Q8N3S3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 RNU6-60P-201ENST00000364792 103 ntBASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 RNA5SP57-201ENST00000459463 123 ntBASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 AC003982.1-202ENST00000469928 248 ntBASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 MIR3945-201ENST00000581853 98 ntBASIC2.79□□□□□ -1.96
PHTF2Q8N3S3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 SNORD115-35-201ENST00000365122 82 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 RNU6-1201P-201ENST00000384227 107 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 MIR196B-201ENST00000384852 84 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 Y_RNA.705-201ENST00000516862 110 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 MIR4764-201ENST00000580680 88 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 MIR4439-201ENST00000583746 80 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 U7.3-201ENST00000616123 62 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 AC008133.2-201ENST00000624540 351 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 AC005336.3-201ENST00000623833 2679 ntBASIC2.78□□□□□ -1.96
PHTF2Q8N3S3 RNU6-1313P-201ENST00000362622 102 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 Y_RNA.95-201ENST00000363079 95 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 RNA5SP173-201ENST00000364857 136 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 Y_RNA.290-201ENST00000364879 114 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 SNORA67.4-201ENST00000384688 142 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 RNU6-972P-201ENST00000391208 107 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 RNA5SP450-201ENST00000411206 102 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 SNORA31.17-201ENST00000516953 127 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 CYP3A52P-201ENST00000563326 91 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 IGLL4P-201ENST00000614590 133 ntBASIC2.77□□□□□ -1.97
PHTF2Q8N3S3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 RNA5SP68-201ENST00000363885 119 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 HMGN1P33-201ENST00000432945 451 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 AC108729.3-201ENST00000513484 108 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 RNU7-2P-201ENST00000516096 62 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 SNORA31.25-201ENST00000517242 134 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 DEFB122-202ENST00000569013 197 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.76□□□□□ -1.97
PHTF2Q8N3S3 MIR26A1-201ENST00000362205 77 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 RNU1-52P-201ENST00000384190 164 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 HMGN2P35-201ENST00000412164 270 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 RNU6-162P-201ENST00000516228 103 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 AP003327.1-201ENST00000529684 127 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 MIR6817-201ENST00000615588 66 ntBASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PHTF2Q8N3S3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms