Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MIR6733-201ENST00000635723 61 ntBASIC2.45□□□□□ -2.02
ATG4DQ86TL0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4DQ86TL0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.45□□□□□ -2.02
ATG4DQ86TL0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.44□□□□□ -2.02
ATG4DQ86TL0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
ATG4DQ86TL0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
ATG4DQ86TL0 RNU6-457P-201ENST00000363999 107 ntBASIC2.44□□□□□ -2.02
ATG4DQ86TL0 SNORD56.5-201ENST00000364281 72 ntBASIC2.44□□□□□ -2.02
ATG4DQ86TL0 RNU6-1229P-201ENST00000364295 107 ntBASIC2.44□□□□□ -2.02
ATG4DQ86TL0 RNU1-109P-201ENST00000383960 147 ntBASIC2.44□□□□□ -2.02
ATG4DQ86TL0 MIR34C-201ENST00000384831 77 ntBASIC2.44□□□□□ -2.02
ATG4DQ86TL0 RPL31P63-201ENST00000422565 375 ntBASIC2.44□□□□□ -2.02
ATG4DQ86TL0 HSPE1P9-201ENST00000440046 311 ntBASIC2.44□□□□□ -2.02
ATG4DQ86TL0 SNORA28-201ENST00000606769 126 ntBASIC2.44□□□□□ -2.02
ATG4DQ86TL0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ATG4DQ86TL0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.43□□□□□ -2.02
ATG4DQ86TL0 MIR449A-201ENST00000362113 91 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 SNORD115-3-201ENST00000363100 82 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 RNU6-23P-201ENST00000363283 107 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 RNU6-1244P-201ENST00000363614 108 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 SNORD38.1-201ENST00000363863 68 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 RNU6-342P-201ENST00000384521 104 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 MIR206-201ENST00000384872 86 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 HMGN2P35-201ENST00000412164 270 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 AL445685.2-201ENST00000422551 342 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 RPS29P28-201ENST00000446439 141 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 RPS29P29-201ENST00000456396 171 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 RNU1-98P-201ENST00000458992 160 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 RNU7-53P-201ENST00000516705 60 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 DNAJC19P9-201ENST00000555084 351 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 AL020996.3-201ENST00000606617 222 ntBASIC2.43□□□□□ -2.02
ATG4DQ86TL0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.43□□□□□ -2.02
ATG4DQ86TL0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ATG4DQ86TL0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.42□□□□□ -2.02
ATG4DQ86TL0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.42□□□□□ -2.02
ATG4DQ86TL0 SNORA1.2-201ENST00000365189 134 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 SNORD21-201ENST00000383953 95 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 SNORA70.7-201ENST00000384159 133 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 MIR9-1-201ENST00000385198 89 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 AC003685.2-201ENST00000422795 395 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 HMGN1P33-201ENST00000432945 451 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 SNORD109B-201ENST00000458961 67 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 SNORD109A-201ENST00000459128 67 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 RPS29P12-201ENST00000460178 152 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 RNA5SP168-201ENST00000516642 112 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 MIR4635-201ENST00000583759 79 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 AC020891.4-201ENST00000605745 93 ntBASIC2.42□□□□□ -2.02
ATG4DQ86TL0 RNU6-833P-201ENST00000363486 107 ntBASIC2.41□□□□□ -2.02
ATG4DQ86TL0 Y_RNA.567-201ENST00000384736 106 ntBASIC2.41□□□□□ -2.02
ATG4DQ86TL0 SNORD28B-201ENST00000390993 75 ntBASIC2.41□□□□□ -2.02
ATG4DQ86TL0 RNU6-613P-201ENST00000410412 108 ntBASIC2.41□□□□□ -2.02
ATG4DQ86TL0 AC093850.1-201ENST00000454121 251 ntBASIC2.41□□□□□ -2.02
ATG4DQ86TL0 AC093729.1-201ENST00000513074 128 ntBASIC2.41□□□□□ -2.02
ATG4DQ86TL0 RNU7-12P-201ENST00000516030 62 ntBASIC2.41□□□□□ -2.02
ATG4DQ86TL0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4DQ86TL0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ATG4DQ86TL0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.4□□□□□ -2.02
ATG4DQ86TL0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.4□□□□□ -2.02
ATG4DQ86TL0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
ATG4DQ86TL0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.4□□□□□ -2.03
ATG4DQ86TL0 RNA5SP261-201ENST00000410536 106 ntBASIC2.4□□□□□ -2.03
ATG4DQ86TL0 UBBP3-201ENST00000445497 241 ntBASIC2.4□□□□□ -2.03
ATG4DQ86TL0 MIR548AR-201ENST00000582191 57 ntBASIC2.4□□□□□ -2.03
ATG4DQ86TL0 AC145423.2-201ENST00000610631 239 ntBASIC2.4□□□□□ -2.03
ATG4DQ86TL0 AC243994.1-201ENST00000618627 109 ntBASIC2.4□□□□□ -2.03
ATG4DQ86TL0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.39□□□□□ -2.03
ATG4DQ86TL0 AP000648.3-201ENST00000623539 4507 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG4DQ86TL0 SNORA24-201ENST00000384096 131 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 Y_RNA.448-201ENST00000384185 108 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 MIR519C-201ENST00000385053 87 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 MIR548G-201ENST00000408442 89 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 SNORA11.4-201ENST00000408823 129 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 RNA5SP184-201ENST00000411071 108 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 AL161932.1-201ENST00000437408 146 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 AC245047.7-201ENST00000440265 293 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 MIR3162-201ENST00000581818 82 ntBASIC2.39□□□□□ -2.03
ATG4DQ86TL0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG4DQ86TL0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.38□□□□□ -2.03
ATG4DQ86TL0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
ATG4DQ86TL0 SPINT5P-201ENST00000448174 155 ntBASIC2.38□□□□□ -2.03
ATG4DQ86TL0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.38□□□□□ -2.03
ATG4DQ86TL0 SNORD67.1-201ENST00000516618 108 ntBASIC2.38□□□□□ -2.03
ATG4DQ86TL0 AL513043.2-201ENST00000573941 143 ntBASIC2.38□□□□□ -2.03
ATG4DQ86TL0 MIR4513-201ENST00000581077 86 ntBASIC2.38□□□□□ -2.03
ATG4DQ86TL0 AC105081.1-201ENST00000617727 106 ntBASIC2.38□□□□□ -2.03
ATG4DQ86TL0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.38□□□□□ -2.03
ATG4DQ86TL0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.38□□□□□ -2.03
ATG4DQ86TL0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
ATG4DQ86TL0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
ATG4DQ86TL0 MIR136-201ENST00000385207 82 ntBASIC2.37□□□□□ -2.03
ATG4DQ86TL0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
ATG4DQ86TL0 RNA5SP210-201ENST00000391034 120 ntBASIC2.37□□□□□ -2.03
ATG4DQ86TL0 AL034345.1-201ENST00000407768 123 ntBASIC2.37□□□□□ -2.03
ATG4DQ86TL0 RNU7-73P-201ENST00000458743 63 ntBASIC2.37□□□□□ -2.03
ATG4DQ86TL0 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
ATG4DQ86TL0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.37□□□□□ -2.03
ATG4DQ86TL0 RNA5SP282-201ENST00000516355 108 ntBASIC2.37□□□□□ -2.03
ATG4DQ86TL0 AC140658.3-201ENST00000567603 271 ntBASIC2.37□□□□□ -2.03
ATG4DQ86TL0 RNU6-90P-201ENST00000606352 106 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms