Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
NHLRC1Q6VVB1 MIRLET7C-201ENST00000362160 84 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-978P-201ENST00000364371 103 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-643P-201ENST00000384018 107 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 SNORD41-201ENST00000386967 70 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-910P-201ENST00000390844 107 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-239P-201ENST00000390990 99 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 RNU4-43P-201ENST00000410628 137 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 AC245047.7-201ENST00000440265 293 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 SNORD77.4-201ENST00000516158 81 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-426P-201ENST00000516464 97 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 MIR5688-201ENST00000580619 83 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 AL591926.4-201ENST00000616895 298 ntBASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-151P-201ENST00000364158 107 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 SNORA20-201ENST00000384662 132 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 SNORA19-201ENST00000384737 128 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 MIR548A2-201ENST00000384956 97 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 AC006461.1-201ENST00000412637 326 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 AL121914.1-201ENST00000450188 156 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 AL133373.1-201ENST00000497098 94 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 MIR4762-201ENST00000585261 75 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 uc_338.4-201ENST00000616635 176 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 MIR376A2-201ENST00000636782 80 ntBASIC1.07□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-508P-201ENST00000363231 103 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-704P-201ENST00000364162 103 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.215-201ENST00000364204 112 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.251-201ENST00000364551 99 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 SNORD50B-201ENST00000364995 70 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 RNU4-11P-201ENST00000365287 132 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 SNORD113-1-201ENST00000365321 69 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.400-201ENST00000383963 111 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.568-201ENST00000384742 113 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 MIR522-201ENST00000385071 87 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 MIR136-201ENST00000385207 82 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-257P-201ENST00000410238 98 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 SNRPGP14-201ENST00000435400 219 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 SNORD111.1-201ENST00000516421 86 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 RNU7-149P-201ENST00000516739 59 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 AC007751.1-201ENST00000529260 376 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 AC097639.2-201ENST00000603159 172 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.778-201ENST00000620203 90 ntBASIC1.06□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.634-201ENST00000364811 113 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-449P-201ENST00000383914 107 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 SNORA1-201ENST00000384107 130 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 RNA5SP496-201ENST00000391240 109 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-588P-201ENST00000410281 105 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AC063976.4-201ENST00000421971 163 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AC048334.1-201ENST00000477975 159 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AC114811.1-201ENST00000507207 168 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AC107027.2-201ENST00000512197 115 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 SNORA25.12-201ENST00000516202 82 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-197P-201ENST00000516680 100 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 RNU2-60P-201ENST00000517290 128 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AC008507.4-201ENST00000585464 127 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 DNAJC19P2-201ENST00000593340 302 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 HSPE1P19-201ENST00000603327 295 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 AL442644.1-201ENST00000454390 3105 ntBASIC1.05□□□□□ -2.24
NHLRC1Q6VVB1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-728P-201ENST00000365375 104 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 SNORD50.2-201ENST00000365465 70 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 RNY3P5-201ENST00000384127 102 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 MIR200A-201ENST00000384875 90 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 MIR613-201ENST00000385248 95 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.586-201ENST00000391146 98 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-460P-201ENST00000391158 108 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 MLLT10P1-201ENST00000418346 262 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
NHLRC1Q6VVB1 MTND5P32-201ENST00000560711 1802 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.218-201ENST00000364218 104 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-1138P-201ENST00000365359 106 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.357-201ENST00000365487 109 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 RNU6-81P-201ENST00000365608 104 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 SNORD61-201ENST00000384252 73 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 Y_RNA.525-201ENST00000384570 113 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 MIR802-201ENST00000390235 94 ntBASIC1.03□□□□□ -2.24
NHLRC1Q6VVB1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms