Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU6-295P-201ENST00000516901 104 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 MIR4778-201ENST00000577635 80 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 AL513534.2-201ENST00000603836 250 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 MIR203B-201ENST00000636080 86 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 AL442644.1-201ENST00000454390 3105 ntBASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.17-201ENST00000362433 111 ntBASIC2.38□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-23P-201ENST00000363283 107 ntBASIC2.38□□□□□ -2.03
CNKSR3Q6P9H4 SNORA27-201ENST00000384323 126 ntBASIC2.38□□□□□ -2.03
CNKSR3Q6P9H4 MIR518A2-201ENST00000384966 87 ntBASIC2.38□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.601-201ENST00000410500 113 ntBASIC2.38□□□□□ -2.03
CNKSR3Q6P9H4 RPS23P4-201ENST00000487908 423 ntBASIC2.38□□□□□ -2.03
CNKSR3Q6P9H4 AC004812.1-201ENST00000540773 146 ntBASIC2.38□□□□□ -2.03
CNKSR3Q6P9H4 MIR4529-201ENST00000578110 78 ntBASIC2.38□□□□□ -2.03
CNKSR3Q6P9H4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 RNU1-58P-201ENST00000362413 163 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 SNORD115-19-201ENST00000363098 82 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 SNORD115-18-201ENST00000363293 82 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 SNORD115-17-201ENST00000364612 82 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 MIR577-201ENST00000385196 96 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 U8.13-201ENST00000390842 128 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 SNORD78.1-201ENST00000390866 65 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 AL353813.1-201ENST00000440700 253 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-998P-201ENST00000515894 101 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 RNU7-61P-201ENST00000515897 61 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-795P-201ENST00000516323 103 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 RNU7-28P-201ENST00000516759 62 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 MIR548Z-201ENST00000584743 97 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 AC012531.4-201ENST00000616509 177 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 MIR8054-201ENST00000620877 86 ntBASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CNKSR3Q6P9H4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-661P-201ENST00000362409 107 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-363P-201ENST00000362895 105 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 SNORA25.6-201ENST00000364121 118 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.219-201ENST00000364232 113 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.241-201ENST00000364470 117 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.360-201ENST00000365512 102 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 MIR605-201ENST00000385078 83 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 RNU11-3P-201ENST00000391111 133 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-644P-201ENST00000391155 98 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 SNORA26.9-201ENST00000391322 122 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 SNORD23.1-201ENST00000408212 104 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 POLR2J4-204ENST00000418424 324 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 BX510359.4-201ENST00000423750 193 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 STAG3L5P-204ENST00000443759 179 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 SNORA31.10-201ENST00000516482 106 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 AC021613.1-201ENST00000623880 111 ntBASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
CNKSR3Q6P9H4 ZNF355P-201ENST00000427301 3216 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 SNORD38C-201ENST00000384381 69 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-163P-201ENST00000384396 106 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 RNA5SP465-201ENST00000391195 109 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 RNU7-45P-201ENST00000459460 63 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 MIR4694-201ENST00000578534 80 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 MIR3670-2-201ENST00000582974 65 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 MIR3670-1-201ENST00000584160 65 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 MIR3670-3-201ENST00000584855 65 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 MIR3670-4-201ENST00000612260 65 ntBASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-170P-201ENST00000362832 104 ntBASIC2.34□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-832P-201ENST00000363319 107 ntBASIC2.34□□□□□ -2.03
CNKSR3Q6P9H4 Y_RNA.507-201ENST00000384500 99 ntBASIC2.34□□□□□ -2.03
CNKSR3Q6P9H4 AL035398.1-201ENST00000430869 322 ntBASIC2.34□□□□□ -2.03
CNKSR3Q6P9H4 RNU7-181P-201ENST00000517234 74 ntBASIC2.34□□□□□ -2.03
CNKSR3Q6P9H4 AC022254.1-201ENST00000567857 235 ntBASIC2.34□□□□□ -2.03
CNKSR3Q6P9H4 RNU6-228P-201ENST00000362700 106 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 Y_RNA.155-201ENST00000363632 101 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 Y_RNA.171-201ENST00000363760 102 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 RNU4-67P-201ENST00000364569 141 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 SNORA48.3-201ENST00000391081 134 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-733P-201ENST00000410759 104 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 AL022718.1-201ENST00000412004 84 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 AC004941.2-201ENST00000427009 228 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 AC015922.2-201ENST00000435593 184 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 AC109327.2-201ENST00000448339 378 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 RNU2-11P-201ENST00000459191 187 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 MIR1270-201ENST00000459320 83 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 RNU7-96P-201ENST00000459535 64 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 RNU6-162P-201ENST00000516228 103 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 AC090821.2-201ENST00000523552 176 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 U7.3-201ENST00000616123 62 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 AC091304.10-201ENST00000641554 121 ntBASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CNKSR3Q6P9H4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-34-201ENST00000362441 82 ntBASIC2.32□□□□□ -2.04
CNKSR3Q6P9H4 SNORD115-12-201ENST00000362583 82 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms