Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
NKX1-1Q15270 SNORD56.3-201ENST00000363507 71 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 RNU6-219P-201ENST00000364728 107 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 RHEBP3-201ENST00000411920 351 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 RN7SL633P-201ENST00000488974 297 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 RNU1-41P-201ENST00000516161 162 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 RNU1-48P-201ENST00000516400 162 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 MIR4666B-201ENST00000578142 81 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 AC008133.2-201ENST00000624540 351 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NKX1-1Q15270 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
NKX1-1Q15270 AC005336.3-201ENST00000623833 2679 ntBASIC3.66□□□□□ -1.82
NKX1-1Q15270 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX1-1Q15270 RNU6-859P-201ENST00000362728 107 ntBASIC3.65□□□□□ -1.83
NKX1-1Q15270 SNORD114-10-201ENST00000363409 72 ntBASIC3.65□□□□□ -1.83
NKX1-1Q15270 RNU1-138P-201ENST00000384093 164 ntBASIC3.65□□□□□ -1.83
NKX1-1Q15270 RNU6-360P-201ENST00000390944 104 ntBASIC3.65□□□□□ -1.83
NKX1-1Q15270 HMGN1P33-201ENST00000432945 451 ntBASIC3.65□□□□□ -1.83
NKX1-1Q15270 RNU6-322P-201ENST00000516010 103 ntBASIC3.65□□□□□ -1.83
NKX1-1Q15270 SNORA64.4-201ENST00000516632 81 ntBASIC3.65□□□□□ -1.83
NKX1-1Q15270 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX1-1Q15270 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.65□□□□□ -1.83
NKX1-1Q15270 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NKX1-1Q15270 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NKX1-1Q15270 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NKX1-1Q15270 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX1-1Q15270 MIR196B-201ENST00000384852 84 ntBASIC3.64□□□□□ -1.83
NKX1-1Q15270 AL513328.1-201ENST00000446460 224 ntBASIC3.64□□□□□ -1.83
NKX1-1Q15270 RNA5SP395-201ENST00000516567 118 ntBASIC3.64□□□□□ -1.83
NKX1-1Q15270 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX1-1Q15270 AC103810.7-201ENST00000607821 91 ntBASIC3.64□□□□□ -1.83
NKX1-1Q15270 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NKX1-1Q15270 AL161431.1-201ENST00000618966 4205 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 MIR423-201ENST00000362201 94 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 RNA5SP68-201ENST00000363885 119 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 RNA5SP225-201ENST00000410874 135 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 RNU6-826P-201ENST00000516827 104 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 RNU6-1006P-201ENST00000516998 103 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 MIR4764-201ENST00000580680 88 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 MIR4435-1-201ENST00000582552 80 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 RNU6-90P-201ENST00000606352 106 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 RNU6-86P-201ENST00000606534 107 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 MIR8065-201ENST00000620577 100 ntBASIC3.63□□□□□ -1.83
NKX1-1Q15270 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NKX1-1Q15270 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX1-1Q15270 RNA5SP383-201ENST00000362934 120 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 Y_RNA.98-201ENST00000363109 102 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 RNU6-342P-201ENST00000384521 104 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 RNY1P4-201ENST00000384595 115 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 MIR520C-201ENST00000385005 87 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 RNU6-279P-201ENST00000391297 101 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 RNU6-602P-201ENST00000411155 105 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 UBL5P1-201ENST00000507979 193 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 RNU7-79P-201ENST00000516082 62 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX1-1Q15270 SNORD14A-201ENST00000606526 91 ntBASIC3.62□□□□□ -1.83
NKX1-1Q15270 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX1-1Q15270 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX1-1Q15270 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX1-1Q15270 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NKX1-1Q15270 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NKX1-1Q15270 RNU6-457P-201ENST00000363999 107 ntBASIC3.61□□□□□ -1.83
NKX1-1Q15270 RPS12P2-201ENST00000439728 269 ntBASIC3.61□□□□□ -1.83
NKX1-1Q15270 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NKX1-1Q15270 RNU6-1163P-201ENST00000364516 107 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 Y_RNA.437-201ENST00000384113 113 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 Y_RNA.448-201ENST00000384185 108 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 SNORD38B-201ENST00000384690 67 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 Y_RNA.567-201ENST00000384736 106 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 SNORA46-201ENST00000384762 135 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 MIR548G-201ENST00000408442 89 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX1-1Q15270 AC234781.5-201ENST00000508429 271 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 RNU6-56P-201ENST00000516986 93 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 MIR6817-201ENST00000615588 66 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 SNORD38B-202ENST00000625943 69 ntBASIC3.6□□□□□ -1.83
NKX1-1Q15270 RN7SL442P-201ENST00000473804 320 ntBASIC3.59□□□□□ -1.83
NKX1-1Q15270 MIR3186-201ENST00000577404 85 ntBASIC3.59□□□□□ -1.83
NKX1-1Q15270 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-1Q15270 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-1Q15270 MIR1261-201ENST00000408659 82 ntBASIC3.58□□□□□ -1.84
NKX1-1Q15270 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX1-1Q15270 SNORD67.1-201ENST00000516618 108 ntBASIC3.58□□□□□ -1.84
NKX1-1Q15270 RNU6-267P-201ENST00000516714 103 ntBASIC3.58□□□□□ -1.84
NKX1-1Q15270 MIR4529-201ENST00000578110 78 ntBASIC3.58□□□□□ -1.84
NKX1-1Q15270 AC104984.5-201ENST00000586878 94 ntBASIC3.58□□□□□ -1.84
NKX1-1Q15270 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-1Q15270 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX1-1Q15270 AC093010.3-201ENST00000570269 15214 ntBASIC3.57□□□□□ -1.84
NKX1-1Q15270 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX1-1Q15270 Y_RNA.247-201ENST00000364500 92 ntBASIC3.57□□□□□ -1.84
NKX1-1Q15270 MIR34C-201ENST00000384831 77 ntBASIC3.57□□□□□ -1.84
NKX1-1Q15270 SPINT5P-201ENST00000448174 155 ntBASIC3.57□□□□□ -1.84
NKX1-1Q15270 AC011753.1-201ENST00000451001 220 ntBASIC3.57□□□□□ -1.84
NKX1-1Q15270 RNA5SP148-201ENST00000516527 94 ntBASIC3.57□□□□□ -1.84
NKX1-1Q15270 MIR3935-201ENST00000583472 104 ntBASIC3.57□□□□□ -1.84
NKX1-1Q15270 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NKX1-1Q15270 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX1-1Q15270 RNU6-1125P-201ENST00000363601 107 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms