Protein–RNA interactions for Protein: Q02413

DSG1, Desmoglein-1, humanhuman

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSG1Q02413 RNU6-922P-201ENST00000516753 99 ntBASIC1.92□□□□□ -2.1
DSG1Q02413 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
DSG1Q02413 TUG1_4.1-201ENST00000619464 181 ntBASIC1.92□□□□□ -2.1
DSG1Q02413 MTND5P32-201ENST00000560711 1802 ntBASIC1.91□□□□□ -2.1
DSG1Q02413 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
DSG1Q02413 Y_RNA.351-201ENST00000365436 96 ntBASIC1.91□□□□□ -2.1
DSG1Q02413 SNORA20-201ENST00000384662 132 ntBASIC1.91□□□□□ -2.1
DSG1Q02413 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.91□□□□□ -2.1
DSG1Q02413 Y_RNA.676-201ENST00000516393 96 ntBASIC1.91□□□□□ -2.1
DSG1Q02413 MIR4498-201ENST00000577599 66 ntBASIC1.91□□□□□ -2.1
DSG1Q02413 Y_RNA.757-201ENST00000578934 114 ntBASIC1.91□□□□□ -2.1
DSG1Q02413 MIR3937-201ENST00000580135 106 ntBASIC1.91□□□□□ -2.1
DSG1Q02413 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
DSG1Q02413 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DSG1Q02413 U8.1-201ENST00000362843 134 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 SNORD1A-201ENST00000364968 72 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 MIR520C-201ENST00000385005 87 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 RNU7-96P-201ENST00000459535 64 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 RPS29P24-201ENST00000486345 171 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 RPS26P48-201ENST00000491713 339 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 Y_RNA.692-201ENST00000516627 105 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 MIR548AR-201ENST00000582191 57 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 U7.2-201ENST00000607576 63 ntBASIC1.9□□□□□ -2.11
DSG1Q02413 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.9□□□□□ -2.11
DSG1Q02413 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
DSG1Q02413 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.9□□□□□ -2.11
DSG1Q02413 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
DSG1Q02413 MIR302B-201ENST00000362188 73 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 AL603914.1-201ENST00000401964 204 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 RNA5SP272-201ENST00000516095 111 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 SNORD111.1-201ENST00000516421 86 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 Y_RNA.690-201ENST00000516603 95 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 MIR4764-201ENST00000580680 88 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 MIR4422-201ENST00000581938 83 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 GHRLOS.1-201ENST00000610995 70 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 AC011603.4-201ENST00000611325 277 ntBASIC1.89□□□□□ -2.11
DSG1Q02413 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
DSG1Q02413 RNU1-133P-201ENST00000364867 167 ntBASIC1.88□□□□□ -2.11
DSG1Q02413 Y_RNA.537-201ENST00000384626 109 ntBASIC1.88□□□□□ -2.11
DSG1Q02413 RNU7-67P-201ENST00000459003 62 ntBASIC1.88□□□□□ -2.11
DSG1Q02413 RNU7-53P-201ENST00000516705 60 ntBASIC1.88□□□□□ -2.11
DSG1Q02413 AC019176.1-201ENST00000518519 225 ntBASIC1.88□□□□□ -2.11
DSG1Q02413 MIR3910-1-201ENST00000580936 111 ntBASIC1.88□□□□□ -2.11
DSG1Q02413 MIR376A2-201ENST00000636782 80 ntBASIC1.88□□□□□ -2.11
DSG1Q02413 MIR342-201ENST00000362212 99 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 MIR302D-201ENST00000362275 68 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 RNY1P11-201ENST00000363759 113 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 MIR539-201ENST00000365690 78 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 SNORA51.10-201ENST00000384418 136 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 SNORD28B-201ENST00000390993 75 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 SNORA67.5-201ENST00000391036 107 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 RNU6-257P-201ENST00000410238 98 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 MTND4LP9-201ENST00000427694 174 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 RPL39P39-201ENST00000455840 151 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 RPS29P29-201ENST00000456396 171 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 RPL30P7-201ENST00000479312 323 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 AC108729.3-201ENST00000513484 108 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 SCARNA15-202ENST00000516881 127 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 AC024614.2-201ENST00000577584 372 ntBASIC1.87□□□□□ -2.11
DSG1Q02413 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
DSG1Q02413 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
DSG1Q02413 Y_RNA.586-201ENST00000391146 98 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 AL035398.1-201ENST00000430869 322 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 RNU6-998P-201ENST00000515894 101 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 Y_RNA.686-201ENST00000516548 134 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 MIR502-201ENST00000606349 86 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 snoU13.31-201ENST00000607291 104 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 MIR4791-201ENST00000607666 84 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 AC243994.1-201ENST00000618627 109 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 AC008133.2-201ENST00000624540 351 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 AC132825.6-201ENST00000638861 357 ntBASIC1.86□□□□□ -2.11
DSG1Q02413 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
DSG1Q02413 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
DSG1Q02413 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
DSG1Q02413 Y_RNA.4-201ENST00000362333 112 ntBASIC1.85□□□□□ -2.11
DSG1Q02413 SNORD41-201ENST00000386967 70 ntBASIC1.85□□□□□ -2.11
DSG1Q02413 RNU5E-3P-201ENST00000515913 68 ntBASIC1.85□□□□□ -2.11
DSG1Q02413 RNU6-113P-201ENST00000516653 101 ntBASIC1.85□□□□□ -2.11
DSG1Q02413 AL596211.1-201ENST00000569873 2277 ntBASIC1.85□□□□□ -2.11
DSG1Q02413 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
DSG1Q02413 BTF3P4-201ENST00000418852 495 ntBASIC1.84□□□□□ -2.11
DSG1Q02413 AC027119.1-201ENST00000440877 241 ntBASIC1.84□□□□□ -2.11
DSG1Q02413 RNU6-1053P-201ENST00000515930 101 ntBASIC1.84□□□□□ -2.11
DSG1Q02413 RNA5SP236-201ENST00000516169 116 ntBASIC1.84□□□□□ -2.11
DSG1Q02413 RNU6-958P-201ENST00000516995 106 ntBASIC1.84□□□□□ -2.11
DSG1Q02413 AL022345.2-201ENST00000606307 135 ntBASIC1.84□□□□□ -2.11
DSG1Q02413 AC091932.4-201ENST00000623386 200 ntBASIC1.84□□□□□ -2.11
DSG1Q02413 RNA5SP48-201ENST00000363969 126 ntBASIC1.83□□□□□ -2.12
DSG1Q02413 Y_RNA.494-201ENST00000384432 111 ntBASIC1.83□□□□□ -2.12
DSG1Q02413 RNU1-78P-201ENST00000391248 165 ntBASIC1.83□□□□□ -2.12
DSG1Q02413 RNU4-62P-201ENST00000410125 130 ntBASIC1.83□□□□□ -2.12
DSG1Q02413 AC245517.4-201ENST00000448601 281 ntBASIC1.83□□□□□ -2.12
DSG1Q02413 RNU2-11P-201ENST00000459191 187 ntBASIC1.83□□□□□ -2.12
DSG1Q02413 RNU2-13P-201ENST00000515909 113 ntBASIC1.83□□□□□ -2.12
DSG1Q02413 RNU2-60P-201ENST00000517290 128 ntBASIC1.83□□□□□ -2.12
DSG1Q02413 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
DSG1Q02413 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms