Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 IGLV3-17-201ENST00000519099 244 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.46□□□□□ -2.02
ERVFC1P60507 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.46□□□□□ -2.02
ERVFC1P60507 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ERVFC1P60507 SNORD115-2-201ENST00000362842 82 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 Y_RNA.219-201ENST00000364232 113 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 SNORD115-20-201ENST00000365099 82 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 RNU6-573P-201ENST00000383938 106 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 SNORA67.3-201ENST00000384366 140 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
ERVFC1P60507 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 RNU6-733P-201ENST00000410759 104 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 RNU6-592P-201ENST00000411333 103 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 SNX2P2-201ENST00000424553 323 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 AC069257.2-201ENST00000441819 155 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 RNA5SP57-201ENST00000459463 123 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 SNORA31.10-201ENST00000516482 106 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 RNU6-1116P-201ENST00000517269 99 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 AC090821.2-201ENST00000523552 176 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 AC026271.5-201ENST00000577873 130 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 MIR5007-201ENST00000583098 95 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 AC095038.3-201ENST00000634439 195 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 AC092881.1-201ENST00000638218 2733 ntBASIC2.45□□□□□ -2.02
ERVFC1P60507 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
ERVFC1P60507 MIR342-201ENST00000362212 99 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 RNU1-58P-201ENST00000362413 163 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 RNU6-832P-201ENST00000363319 107 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 SNORA4.2-201ENST00000365313 147 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 Y_RNA.360-201ENST00000365512 102 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 DEFA7P-201ENST00000382676 285 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 Y_RNA.494-201ENST00000384432 111 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 MIR577-201ENST00000385196 96 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 MIR29C-201ENST00000385231 88 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 RNU6-1319P-201ENST00000390855 104 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 RNU6-747P-201ENST00000390928 104 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 RNU6-241P-201ENST00000391148 104 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 RNU6-177P-201ENST00000411257 104 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 AC069114.2-201ENST00000604699 304 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 Y_RNA.773-201ENST00000607168 90 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 AC067747.1-201ENST00000608026 250 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 MIR1255B1-201ENST00000636325 63 ntBASIC2.44□□□□□ -2.02
ERVFC1P60507 RNU4-67P-201ENST00000364569 141 ntBASIC2.43□□□□□ -2.02
ERVFC1P60507 Y_RNA.290-201ENST00000364879 114 ntBASIC2.43□□□□□ -2.02
ERVFC1P60507 RNU6-1134P-201ENST00000365156 101 ntBASIC2.43□□□□□ -2.02
ERVFC1P60507 RNU6-409P-201ENST00000384114 104 ntBASIC2.43□□□□□ -2.02
ERVFC1P60507 MIR1267-201ENST00000408723 78 ntBASIC2.43□□□□□ -2.02
ERVFC1P60507 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.43□□□□□ -2.02
ERVFC1P60507 AC004941.2-201ENST00000427009 228 ntBASIC2.43□□□□□ -2.02
ERVFC1P60507 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ERVFC1P60507 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.43□□□□□ -2.02
ERVFC1P60507 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
ERVFC1P60507 RNY1P10-201ENST00000363268 113 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 SNORA1.2-201ENST00000365189 134 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 RNU6-950P-201ENST00000384651 107 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 SNORD78.1-201ENST00000390866 65 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 AL023284.1-201ENST00000403956 276 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 Y_RNA.593-201ENST00000410292 98 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 RNU4-69P-201ENST00000410677 143 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 AC011753.1-201ENST00000451001 220 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 RNU2-11P-201ENST00000459191 187 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 RNU6-1018P-201ENST00000516577 106 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 RNU6-548P-201ENST00000517083 115 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 MIR203B-201ENST00000636080 86 ntBASIC2.42□□□□□ -2.02
ERVFC1P60507 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ERVFC1P60507 Y_RNA.17-201ENST00000362433 111 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 RNU6-170P-201ENST00000362832 104 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 Y_RNA.155-201ENST00000363632 101 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 Y_RNA.377-201ENST00000365644 108 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 MIR221-201ENST00000385135 110 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 AL034345.1-201ENST00000407768 123 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.41□□□□□ -2.02
ERVFC1P60507 HMGN2P23-201ENST00000456759 269 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 AL353997.5-201ENST00000618886 171 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 MIR6841-201ENST00000637129 72 ntBASIC2.41□□□□□ -2.02
ERVFC1P60507 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ERVFC1P60507 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.02
ERVFC1P60507 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ERVFC1P60507 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ERVFC1P60507 MIR494-201ENST00000349529 81 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 MIR21-201ENST00000362134 72 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 Y_RNA.96-201ENST00000363092 109 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 SNORA24-201ENST00000384096 131 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 U8.16-201ENST00000391279 133 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 AL451046.2-201ENST00000403074 277 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 AL353813.1-201ENST00000440700 253 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 RNU7-61P-201ENST00000515897 61 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 RNU7-181P-201ENST00000517234 74 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 MIR3152-201ENST00000579801 74 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 SNORD14A-201ENST00000606526 91 ntBASIC2.4□□□□□ -2.03
ERVFC1P60507 RNU7-113P-201ENST00000459273 62 ntBASIC2.39□□□□□ -2.03
ERVFC1P60507 RNU2-13P-201ENST00000515909 113 ntBASIC2.39□□□□□ -2.03
ERVFC1P60507 RNU6-1258P-201ENST00000516911 111 ntBASIC2.39□□□□□ -2.03
ERVFC1P60507 RNA5SP402-201ENST00000517148 110 ntBASIC2.39□□□□□ -2.03
ERVFC1P60507 AC012531.4-201ENST00000616509 177 ntBASIC2.39□□□□□ -2.03
ERVFC1P60507 MIR219B-201ENST00000637023 88 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms