Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 RPL23AP63-201ENST00000498752 471 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 SUB1P4-201ENST00000566062 339 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 MIR5009-201ENST00000578736 100 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 MIR6873-201ENST00000622788 63 ntBASIC2.19□□□□□ -2.06
ITGA1P56199 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.18□□□□□ -2.06
ITGA1P56199 AL596028.1-201ENST00000326971 197 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 Y_RNA.348-201ENST00000365403 103 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 RNU6-905P-201ENST00000384434 107 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 MIR516B2-201ENST00000385190 85 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 SNORD23.1-201ENST00000408212 104 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 RNY4P30-201ENST00000410216 95 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 RNA5SP144-201ENST00000410846 116 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.18□□□□□ -2.06
ITGA1P56199 SNORA31.4-201ENST00000516049 129 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 AC068339.1-201ENST00000526965 141 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
ITGA1P56199 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
ITGA1P56199 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.17□□□□□ -2.06
ITGA1P56199 RNU6-112P-201ENST00000363599 104 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 SNORA1.2-201ENST00000365189 134 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 Y_RNA.369-201ENST00000365568 117 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 RNA5SP501-201ENST00000410990 112 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 RNU2-11P-201ENST00000459191 187 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 AC107297.1-201ENST00000459991 176 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 MIR4709-201ENST00000577272 72 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 AP001318.4-201ENST00000616637 121 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 AC021613.1-201ENST00000623880 111 ntBASIC2.17□□□□□ -2.06
ITGA1P56199 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
ITGA1P56199 RNU6-640P-201ENST00000363693 105 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 SNORA51.10-201ENST00000384418 136 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 RNU6-296P-201ENST00000384608 107 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 MIR136-201ENST00000385207 82 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 AL022718.1-201ENST00000412004 84 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 AC093850.1-201ENST00000454121 251 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 AC021506.2-201ENST00000612354 169 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 AL513423.1-201ENST00000621695 132 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 MIR6766-201ENST00000622641 72 ntBASIC2.16□□□□□ -2.06
ITGA1P56199 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ITGA1P56199 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ITGA1P56199 AC092881.1-201ENST00000638218 2733 ntBASIC2.15□□□□□ -2.06
ITGA1P56199 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
ITGA1P56199 Y_RNA.544-201ENST00000384650 113 ntBASIC2.15□□□□□ -2.07
ITGA1P56199 snoU13.27-201ENST00000459278 104 ntBASIC2.15□□□□□ -2.07
ITGA1P56199 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
ITGA1P56199 SNORA72.7-201ENST00000516349 94 ntBASIC2.15□□□□□ -2.07
ITGA1P56199 RNA5SP481-201ENST00000516814 122 ntBASIC2.15□□□□□ -2.07
ITGA1P56199 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.15□□□□□ -2.07
ITGA1P56199 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.15□□□□□ -2.07
ITGA1P56199 AL162726.3-218ENST00000636401 95 ntBASIC2.15□□□□□ -2.07
ITGA1P56199 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
ITGA1P56199 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ITGA1P56199 Y_RNA.370-201ENST00000365589 108 ntBASIC2.14□□□□□ -2.07
ITGA1P56199 SNORA70.7-201ENST00000384159 133 ntBASIC2.14□□□□□ -2.07
ITGA1P56199 MIR221-201ENST00000385135 110 ntBASIC2.14□□□□□ -2.07
ITGA1P56199 MIR660-201ENST00000385235 97 ntBASIC2.14□□□□□ -2.07
ITGA1P56199 AC099513.1-201ENST00000490423 301 ntBASIC2.14□□□□□ -2.07
ITGA1P56199 RNU7-193P-201ENST00000516723 65 ntBASIC2.14□□□□□ -2.07
ITGA1P56199 RNU7-6P-201ENST00000516845 62 ntBASIC2.14□□□□□ -2.07
ITGA1P56199 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.14□□□□□ -2.07
ITGA1P56199 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ITGA1P56199 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.14□□□□□ -2.07
ITGA1P56199 POLR2J4-204ENST00000418424 324 ntBASIC2.13□□□□□ -2.07
ITGA1P56199 AL512326.2-201ENST00000426359 151 ntBASIC2.13□□□□□ -2.07
ITGA1P56199 PGBD4P5-201ENST00000445958 426 ntBASIC2.13□□□□□ -2.07
ITGA1P56199 RPS23P4-201ENST00000487908 423 ntBASIC2.13□□□□□ -2.07
ITGA1P56199 SNORA40.13-201ENST00000516379 120 ntBASIC2.13□□□□□ -2.07
ITGA1P56199 AC004812.1-201ENST00000540773 146 ntBASIC2.13□□□□□ -2.07
ITGA1P56199 MIR6132-201ENST00000622083 109 ntBASIC2.13□□□□□ -2.07
ITGA1P56199 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.13□□□□□ -2.07
ITGA1P56199 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ITGA1P56199 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ITGA1P56199 Y_RNA.531-201ENST00000384589 121 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 MIR590-201ENST00000385008 97 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 SNORA19.1-201ENST00000410656 129 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 AL603825.1-201ENST00000438481 80 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 RPL39P25-201ENST00000449384 154 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 RNU7-45P-201ENST00000459460 63 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 AC141557.1-201ENST00000540982 400 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 U1.36-201ENST00000620684 176 ntBASIC2.12□□□□□ -2.07
ITGA1P56199 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ITGA1P56199 Y_RNA.78-201ENST00000362970 110 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNA5SP99-201ENST00000364020 114 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 MIR526A1-201ENST00000384897 85 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-1319P-201ENST00000390855 104 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-816P-201ENST00000390914 107 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-747P-201ENST00000390928 104 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-241P-201ENST00000391148 104 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-1268P-201ENST00000391214 107 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-1239P-201ENST00000391310 107 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 MIR1912-201ENST00000410389 80 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU6-177P-201ENST00000411257 104 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RPS29P29-201ENST00000456396 171 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 RNU7-67P-201ENST00000459003 62 ntBASIC2.11□□□□□ -2.07
ITGA1P56199 AC090255.1-201ENST00000495779 349 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms