Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-733P-201ENST00000410759 104 ntBASIC2.67□□□□□ -1.98
USP11P51784 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.67□□□□□ -1.98
USP11P51784 AC004941.2-201ENST00000427009 228 ntBASIC2.67□□□□□ -1.98
USP11P51784 RNU6-162P-201ENST00000516228 103 ntBASIC2.67□□□□□ -1.98
USP11P51784 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.67□□□□□ -1.98
USP11P51784 AC022254.1-201ENST00000567857 235 ntBASIC2.67□□□□□ -1.98
USP11P51784 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
USP11P51784 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP11P51784 RNU6-409P-201ENST00000384114 104 ntBASIC2.66□□□□□ -1.98
USP11P51784 RNU6-679P-201ENST00000391003 106 ntBASIC2.66□□□□□ -1.98
USP11P51784 AC096949.1-201ENST00000412047 152 ntBASIC2.66□□□□□ -1.98
USP11P51784 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.66□□□□□ -1.98
USP11P51784 RNU1-41P-201ENST00000516161 162 ntBASIC2.66□□□□□ -1.98
USP11P51784 RNU1-48P-201ENST00000516400 162 ntBASIC2.66□□□□□ -1.98
USP11P51784 SNORD53-201ENST00000579969 78 ntBASIC2.66□□□□□ -1.98
USP11P51784 MIR4777-201ENST00000583710 86 ntBASIC2.66□□□□□ -1.98
USP11P51784 U7.3-201ENST00000616123 62 ntBASIC2.66□□□□□ -1.98
USP11P51784 AC091304.10-201ENST00000641554 121 ntBASIC2.66□□□□□ -1.98
USP11P51784 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP11P51784 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP11P51784 Z82195.2-201ENST00000612348 18351 ntBASIC2.65□□□□□ -1.98
USP11P51784 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.99
USP11P51784 AP006437.1-201ENST00000641440 3685 ntBASIC2.65□□□□□ -1.99
USP11P51784 SNORA4.2-201ENST00000365313 147 ntBASIC2.65□□□□□ -1.99
USP11P51784 Y_RNA.470-201ENST00000384307 117 ntBASIC2.65□□□□□ -1.99
USP11P51784 MIR1267-201ENST00000408723 78 ntBASIC2.65□□□□□ -1.99
USP11P51784 RNA5SP168-201ENST00000516642 112 ntBASIC2.65□□□□□ -1.99
USP11P51784 RNA5SP402-201ENST00000517148 110 ntBASIC2.65□□□□□ -1.99
USP11P51784 MIR3126-201ENST00000577443 74 ntBASIC2.65□□□□□ -1.99
USP11P51784 SNORA28-201ENST00000606769 126 ntBASIC2.65□□□□□ -1.99
USP11P51784 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
USP11P51784 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.65□□□□□ -1.99
USP11P51784 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
USP11P51784 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
USP11P51784 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.64□□□□□ -1.99
USP11P51784 Y_RNA.10-201ENST00000362371 110 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU1-58P-201ENST00000362413 163 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6-228P-201ENST00000362700 106 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6-833P-201ENST00000363486 107 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6-1019P-201ENST00000364424 107 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6-424P-201ENST00000384367 105 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6-1319P-201ENST00000390855 104 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6-747P-201ENST00000390928 104 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6-241P-201ENST00000391148 104 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU4-69P-201ENST00000410677 143 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6-177P-201ENST00000411257 104 ntBASIC2.64□□□□□ -1.99
USP11P51784 AC109327.2-201ENST00000448339 378 ntBASIC2.64□□□□□ -1.99
USP11P51784 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.64□□□□□ -1.99
USP11P51784 MIR5694-201ENST00000581190 76 ntBASIC2.64□□□□□ -1.99
USP11P51784 AC005786.1-201ENST00000588553 154 ntBASIC2.64□□□□□ -1.99
USP11P51784 FAM71BP1-201ENST00000604431 523 ntBASIC2.64□□□□□ -1.99
USP11P51784 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.64□□□□□ -1.99
USP11P51784 MIR6895-201ENST00000613497 78 ntBASIC2.64□□□□□ -1.99
USP11P51784 SNORD115-2-201ENST00000362842 82 ntBASIC2.63□□□□□ -1.99
USP11P51784 SNORD115-20-201ENST00000365099 82 ntBASIC2.63□□□□□ -1.99
USP11P51784 RNU6-616P-201ENST00000384353 107 ntBASIC2.63□□□□□ -1.99
USP11P51784 SNORA11.4-201ENST00000408823 129 ntBASIC2.63□□□□□ -1.99
USP11P51784 SNORA7.5-201ENST00000410672 110 ntBASIC2.63□□□□□ -1.99
USP11P51784 RNU4-53P-201ENST00000410828 140 ntBASIC2.63□□□□□ -1.99
USP11P51784 RN7SKP192-201ENST00000411291 327 ntBASIC2.63□□□□□ -1.99
USP11P51784 BTF3P4-201ENST00000418852 495 ntBASIC2.63□□□□□ -1.99
USP11P51784 BX510359.4-201ENST00000423750 193 ntBASIC2.63□□□□□ -1.99
USP11P51784 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.63□□□□□ -1.99
USP11P51784 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.62□□□□□ -1.99
USP11P51784 AC069257.2-201ENST00000441819 155 ntBASIC2.62□□□□□ -1.99
USP11P51784 RNU7-113P-201ENST00000459273 62 ntBASIC2.62□□□□□ -1.99
USP11P51784 AC022137.1-201ENST00000483735 151 ntBASIC2.62□□□□□ -1.99
USP11P51784 RNA5SP395-201ENST00000516567 118 ntBASIC2.62□□□□□ -1.99
USP11P51784 AC026271.5-201ENST00000577873 130 ntBASIC2.62□□□□□ -1.99
USP11P51784 MIR5094-201ENST00000578766 85 ntBASIC2.62□□□□□ -1.99
USP11P51784 MIR548AE2-201ENST00000583456 67 ntBASIC2.62□□□□□ -1.99
USP11P51784 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.62□□□□□ -1.99
USP11P51784 MIR6841-201ENST00000637129 72 ntBASIC2.62□□□□□ -1.99
USP11P51784 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USP11P51784 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
USP11P51784 RNA5SP432-201ENST00000362480 116 ntBASIC2.61□□□□□ -1.99
USP11P51784 Y_RNA.73-201ENST00000362910 113 ntBASIC2.61□□□□□ -1.99
USP11P51784 Y_RNA.190-201ENST00000363964 101 ntBASIC2.61□□□□□ -1.99
USP11P51784 RNU6-60P-201ENST00000364792 103 ntBASIC2.61□□□□□ -1.99
USP11P51784 Y_RNA.299-201ENST00000364973 94 ntBASIC2.61□□□□□ -1.99
USP11P51784 MIR144-201ENST00000384886 86 ntBASIC2.61□□□□□ -1.99
USP11P51784 MIR516B2-201ENST00000385190 85 ntBASIC2.61□□□□□ -1.99
USP11P51784 SNORA26.6-201ENST00000391256 115 ntBASIC2.61□□□□□ -1.99
USP11P51784 AL451046.2-201ENST00000403074 277 ntBASIC2.61□□□□□ -1.99
USP11P51784 RNU6-1190P-201ENST00000410811 104 ntBASIC2.61□□□□□ -1.99
USP11P51784 RNA5SP225-201ENST00000410874 135 ntBASIC2.61□□□□□ -1.99
USP11P51784 UBL5P3-201ENST00000475112 231 ntBASIC2.61□□□□□ -1.99
USP11P51784 RPL23AP63-201ENST00000498752 471 ntBASIC2.61□□□□□ -1.99
USP11P51784 AC069114.2-201ENST00000604699 304 ntBASIC2.61□□□□□ -1.99
USP11P51784 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.61□□□□□ -1.99
USP11P51784 U8.2-201ENST00000363156 134 ntBASIC2.6□□□□□ -1.99
USP11P51784 SNORA6-201ENST00000384033 151 ntBASIC2.6□□□□□ -1.99
USP11P51784 RNU6-1124P-201ENST00000384169 107 ntBASIC2.6□□□□□ -1.99
USP11P51784 RNU1-148P-201ENST00000384472 162 ntBASIC2.6□□□□□ -1.99
USP11P51784 RNU2-13P-201ENST00000515909 113 ntBASIC2.6□□□□□ -1.99
USP11P51784 MIR6766-201ENST00000622641 72 ntBASIC2.6□□□□□ -1.99
USP11P51784 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
USP11P51784 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USP11P51784 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USP11P51784 RNY1P1-201ENST00000364372 112 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms