Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 Y_RNA.556-201ENST00000384677 113 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 RNU6-493P-201ENST00000391321 108 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 AC090844.1-201ENST00000422019 156 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 AF228730.3-201ENST00000436691 102 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.86□□□□□ -2.27
BRCC3P46736 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 RNU6-111P-201ENST00000517179 105 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 AC109810.1-201ENST00000534066 224 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 MIR6516-201ENST00000630554 81 ntBASIC0.86□□□□□ -2.27
BRCC3P46736 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
BRCC3P46736 Y_RNA.23-201ENST00000362496 106 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 Y_RNA.37-201ENST00000362606 108 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 RNU6-923P-201ENST00000364753 107 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 Y_RNA.308-201ENST00000365043 101 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 Y_RNA.330-201ENST00000365230 109 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 SNORA1-201ENST00000384107 130 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 RNU6-196P-201ENST00000384315 107 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 RNA5SP95-201ENST00000410319 137 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.85□□□□□ -2.27
BRCC3P46736 POLR2J4-204ENST00000418424 324 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 RNU6-1299P-201ENST00000516316 100 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.85□□□□□ -2.27
BRCC3P46736 MIR4308-201ENST00000580634 81 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 MIR3149-201ENST00000584629 83 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 MIR376A2-201ENST00000636782 80 ntBASIC0.85□□□□□ -2.27
BRCC3P46736 RNU6-888P-201ENST00000363010 101 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 SNORD115-28-201ENST00000363931 81 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 Y_RNA.262-201ENST00000364641 102 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 Y_RNA.452-201ENST00000384202 108 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 RNU6-463P-201ENST00000384340 107 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 Y_RNA.537-201ENST00000384626 109 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 MIR1302-3-201ENST00000408128 138 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 MIR548H3-201ENST00000408771 118 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 SNORA18.4-201ENST00000516440 124 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 RNU6-365P-201ENST00000517113 106 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.84□□□□□ -2.27
BRCC3P46736 AC023827.1-201ENST00000569247 97 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 MIR4662B-201ENST00000579498 81 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 AC131055.1-201ENST00000584626 316 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 AL162730.1-201ENST00000605734 292 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 AC108706.1-201ENST00000611053 297 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 SEPT14P17-201ENST00000617978 177 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 AC243994.1-201ENST00000618627 109 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 7SK.10-201ENST00000621414 298 ntBASIC0.84□□□□□ -2.27
BRCC3P46736 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
BRCC3P46736 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
BRCC3P46736 Y_RNA.144-201ENST00000363521 113 ntBASIC0.83□□□□□ -2.28
BRCC3P46736 RNU6-702P-201ENST00000364982 107 ntBASIC0.83□□□□□ -2.28
BRCC3P46736 SNORD24-201ENST00000383884 75 ntBASIC0.83□□□□□ -2.28
BRCC3P46736 SNORA51.10-201ENST00000384418 136 ntBASIC0.83□□□□□ -2.28
BRCC3P46736 Y_RNA.626-201ENST00000411288 95 ntBASIC0.83□□□□□ -2.28
BRCC3P46736 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
BRCC3P46736 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.83□□□□□ -2.28
BRCC3P46736 RNA5SP48-201ENST00000363969 126 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 Y_RNA.199-201ENST00000364014 102 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 Y_RNA.241-201ENST00000364470 117 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 RNU4-17P-201ENST00000365598 141 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 Y_RNA.432-201ENST00000384087 111 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 RNY3P5-201ENST00000384127 102 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 RNU6-913P-201ENST00000390913 95 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 RNU2-70P-201ENST00000410718 179 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 RNU2-55P-201ENST00000411146 174 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 RNU6-504P-201ENST00000516568 104 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 AC036111.3-201ENST00000526389 112 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 AP003484.1-201ENST00000530974 250 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 AC097639.2-201ENST00000603159 172 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 RNU2-4P-201ENST00000606190 192 ntBASIC0.82□□□□□ -2.28
BRCC3P46736 Y_RNA.242-201ENST00000364473 110 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 SNORA24-201ENST00000384096 131 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 RNU6-125P-201ENST00000384505 107 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 SNORD77.3-201ENST00000391113 65 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 RNU6-847P-201ENST00000411115 108 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.81□□□□□ -2.28
BRCC3P46736 RNU6-1023P-201ENST00000516137 106 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 RNA5SP153-201ENST00000516498 76 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 RNU6-958P-201ENST00000516995 106 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.81□□□□□ -2.28
BRCC3P46736 PVT1_3.1-201ENST00000620853 95 ntBASIC0.81□□□□□ -2.28
BRCC3P46736 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-34-201ENST00000362441 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-12-201ENST00000362583 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-29-201ENST00000362834 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-9-201ENST00000362912 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-21-201ENST00000362963 81 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-14-201ENST00000363090 81 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-13-201ENST00000363358 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-41-201ENST00000363608 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-11-201ENST00000363616 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-5-201ENST00000363633 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-39-201ENST00000363694 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-4-201ENST00000363810 82 ntBASIC0.8□□□□□ -2.28
BRCC3P46736 SNORD115-16-201ENST00000363887 82 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms