Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-612P-201ENST00000516909 102 ntBASIC-1.33□□□□□ -2.62
HTTP42858 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.33□□□□□ -2.62
HTTP42858 CPDP1-201ENST00000579660 283 ntBASIC-1.33□□□□□ -2.62
HTTP42858 MIR1264-201ENST00000616374 69 ntBASIC-1.33□□□□□ -2.62
HTTP42858 RNY3P11-201ENST00000364153 102 ntBASIC-1.33□□□□□ -2.62
HTTP42858 RNU4-10P-201ENST00000364383 140 ntBASIC-1.33□□□□□ -2.62
HTTP42858 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.33□□□□□ -2.62
HTTP42858 RNU6-767P-201ENST00000384132 107 ntBASIC-1.33□□□□□ -2.62
HTTP42858 RNU4-70P-201ENST00000384579 139 ntBASIC-1.33□□□□□ -2.62
HTTP42858 MIR507-201ENST00000385234 94 ntBASIC-1.33□□□□□ -2.62
HTTP42858 RNU7-51P-201ENST00000516560 62 ntBASIC-1.33□□□□□ -2.62
HTTP42858 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.33□□□□□ -2.62
HTTP42858 AL353691.2-201ENST00000443795 59 ntBASIC-1.34□□□□□ -2.62
HTTP42858 SEPT14P24-201ENST00000447236 180 ntBASIC-1.34□□□□□ -2.62
HTTP42858 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.34□□□□□ -2.62
HTTP42858 FGF7P6-202ENST00000451282 293 ntBASIC-1.34□□□□□ -2.62
HTTP42858 AC023449.1-201ENST00000454464 154 ntBASIC-1.34□□□□□ -2.62
HTTP42858 RNU7-96P-201ENST00000459535 64 ntBASIC-1.34□□□□□ -2.62
HTTP42858 FGF7P4-201ENST00000509595 295 ntBASIC-1.34□□□□□ -2.62
HTTP42858 SEPT14P4-201ENST00000513445 186 ntBASIC-1.34□□□□□ -2.62
HTTP42858 RNU7-116P-201ENST00000516940 62 ntBASIC-1.34□□□□□ -2.62
HTTP42858 U6.109-201ENST00000636749 87 ntBASIC-1.34□□□□□ -2.62
HTTP42858 AL117351.1-201ENST00000438864 766 ntBASIC-1.34□□□□□ -2.62
HTTP42858 MIR548AY-201ENST00000617669 107 ntBASIC-1.34□□□□□ -2.62
HTTP42858 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.35□□□□□ -2.62
HTTP42858 MIR216B-201ENST00000390186 82 ntBASIC-1.35□□□□□ -2.62
HTTP42858 RPS27AP14-201ENST00000422868 454 ntBASIC-1.35□□□□□ -2.62
HTTP42858 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.35□□□□□ -2.62
HTTP42858 AL669831.3-213ENST00000636676 183 ntBASIC-1.35□□□□□ -2.62
HTTP42858 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.35□□□□□ -2.63
HTTP42858 AC009961.2-201ENST00000435771 251 ntBASIC-1.35□□□□□ -2.63
HTTP42858 RNU6-998P-201ENST00000515894 101 ntBASIC-1.35□□□□□ -2.63
HTTP42858 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.35□□□□□ -2.63
HTTP42858 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.35□□□□□ -2.63
HTTP42858 MIR3920-201ENST00000581751 86 ntBASIC-1.35□□□□□ -2.63
HTTP42858 AC080013.3-201ENST00000606839 578 ntBASIC-1.35□□□□□ -2.63
HTTP42858 AL133215.3-201ENST00000609801 448 ntBASIC-1.35□□□□□ -2.63
HTTP42858 RNU6-924P-201ENST00000362926 108 ntBASIC-1.35□□□□□ -2.63
HTTP42858 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.35□□□□□ -2.63
HTTP42858 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.35□□□□□ -2.63
HTTP42858 MIR558-201ENST00000384920 94 ntBASIC-1.35□□□□□ -2.63
HTTP42858 MIR450B-201ENST00000401182 78 ntBASIC-1.35□□□□□ -2.63
HTTP42858 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.35□□□□□ -2.63
HTTP42858 SNORD63B-201ENST00000411005 70 ntBASIC-1.35□□□□□ -2.63
HTTP42858 MTATP6P19-201ENST00000413797 659 ntBASIC-1.35□□□□□ -2.63
HTTP42858 RNU6-397P-201ENST00000516226 104 ntBASIC-1.35□□□□□ -2.63
HTTP42858 AC060788.1-201ENST00000521318 469 ntBASIC-1.35□□□□□ -2.63
HTTP42858 SNORD114-10-201ENST00000363409 72 ntBASIC-1.36□□□□□ -2.63
HTTP42858 MIR582-201ENST00000365731 98 ntBASIC-1.36□□□□□ -2.63
HTTP42858 RNU6-933P-201ENST00000384424 107 ntBASIC-1.36□□□□□ -2.63
HTTP42858 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.36□□□□□ -2.63
HTTP42858 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.36□□□□□ -2.63
HTTP42858 SNORD36C-201ENST00000516733 66 ntBASIC-1.36□□□□□ -2.63
HTTP42858 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.36□□□□□ -2.63
HTTP42858 MIR4789-201ENST00000577469 82 ntBASIC-1.36□□□□□ -2.63
HTTP42858 RNU5B-1-201ENST00000363286 116 ntBASIC-1.36□□□□□ -2.63
HTTP42858 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.36□□□□□ -2.63
HTTP42858 RNU6-266P-201ENST00000364225 107 ntBASIC-1.36□□□□□ -2.63
HTTP42858 RNU6-841P-201ENST00000383872 107 ntBASIC-1.36□□□□□ -2.63
HTTP42858 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.36□□□□□ -2.63
HTTP42858 MTCO3P39-201ENST00000514812 518 ntBASIC-1.36□□□□□ -2.63
HTTP42858 AC245884.10-201ENST00000597355 337 ntBASIC-1.36□□□□□ -2.63
HTTP42858 SNORD115-28-201ENST00000363931 81 ntBASIC-1.37□□□□□ -2.63
HTTP42858 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.37□□□□□ -2.63
HTTP42858 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.37□□□□□ -2.63
HTTP42858 USP9YP23-201ENST00000455085 407 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU7-138P-201ENST00000459479 64 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU6-720P-201ENST00000516363 108 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU7-25P-201ENST00000516544 62 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AC124303.1-201ENST00000605703 360 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AC132825.7-201ENST00000638744 335 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AL589826.1-201ENST00000340697 249 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU6-79P-201ENST00000362511 107 ntBASIC-1.37□□□□□ -2.63
HTTP42858 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.37□□□□□ -2.63
HTTP42858 SNORD116-9-201ENST00000384000 95 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU6-641P-201ENST00000384006 107 ntBASIC-1.37□□□□□ -2.63
HTTP42858 SNORD116-3-201ENST00000384287 95 ntBASIC-1.37□□□□□ -2.63
HTTP42858 SNORD116-8-201ENST00000384365 95 ntBASIC-1.37□□□□□ -2.63
HTTP42858 SNORD116-7-201ENST00000384404 95 ntBASIC-1.37□□□□□ -2.63
HTTP42858 SNORD116-5-201ENST00000384462 95 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU6-393P-201ENST00000384475 107 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU4-88P-201ENST00000411220 86 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AL161932.1-201ENST00000437408 146 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AC090616.4-201ENST00000448026 115 ntBASIC-1.37□□□□□ -2.63
HTTP42858 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AC069545.1-201ENST00000605671 358 ntBASIC-1.37□□□□□ -2.63
HTTP42858 uc_338.11-201ENST00000619132 160 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AC068137.4-201ENST00000638485 296 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU4-24P-201ENST00000364565 139 ntBASIC-1.37□□□□□ -2.63
HTTP42858 MIR521-1-201ENST00000384902 87 ntBASIC-1.37□□□□□ -2.63
HTTP42858 SNORD72-201ENST00000390994 80 ntBASIC-1.37□□□□□ -2.63
HTTP42858 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.37□□□□□ -2.63
HTTP42858 ACA59.1-201ENST00000515966 143 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU6-436P-201ENST00000516171 114 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AC002044.1-201ENST00000606707 158 ntBASIC-1.37□□□□□ -2.63
HTTP42858 AC007494.3-201ENST00000624660 743 ntBASIC-1.37□□□□□ -2.63
HTTP42858 RNU6-653P-201ENST00000363074 106 ntBASIC-1.38□□□□□ -2.63
HTTP42858 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.38□□□□□ -2.63
HTTP42858 RNU6-760P-201ENST00000516078 97 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms