Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RPL23AP6-201ENST00000446637 472 ntBASIC2.85□□□□□ -1.95
GPC1P35052 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
GPC1P35052 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.85□□□□□ -1.95
GPC1P35052 AC021506.2-201ENST00000612354 169 ntBASIC2.85□□□□□ -1.95
GPC1P35052 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.85□□□□□ -1.95
GPC1P35052 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
GPC1P35052 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
GPC1P35052 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
GPC1P35052 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
GPC1P35052 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.84□□□□□ -1.95
GPC1P35052 RNA5SP138-201ENST00000365098 114 ntBASIC2.84□□□□□ -1.95
GPC1P35052 RNU6-524P-201ENST00000384270 107 ntBASIC2.84□□□□□ -1.95
GPC1P35052 MIR520A-201ENST00000384862 85 ntBASIC2.84□□□□□ -1.95
GPC1P35052 RNU6-1321P-201ENST00000390905 107 ntBASIC2.84□□□□□ -1.95
GPC1P35052 RNU7-79P-201ENST00000516082 62 ntBASIC2.84□□□□□ -1.95
GPC1P35052 RNVU1-2-201ENST00000516326 135 ntBASIC2.84□□□□□ -1.95
GPC1P35052 RN7SKP57-201ENST00000517248 293 ntBASIC2.84□□□□□ -1.95
GPC1P35052 MIR4709-201ENST00000577272 72 ntBASIC2.84□□□□□ -1.95
GPC1P35052 RPL12P50-201ENST00000603116 116 ntBASIC2.84□□□□□ -1.95
GPC1P35052 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.84□□□□□ -1.95
GPC1P35052 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
GPC1P35052 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.96
GPC1P35052 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.83□□□□□ -1.96
GPC1P35052 Y_RNA.94-201ENST00000363068 106 ntBASIC2.83□□□□□ -1.96
GPC1P35052 Y_RNA.354-201ENST00000365448 111 ntBASIC2.83□□□□□ -1.96
GPC1P35052 MIR660-201ENST00000385235 97 ntBASIC2.83□□□□□ -1.96
GPC1P35052 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.83□□□□□ -1.96
GPC1P35052 RNA5SP437-201ENST00000517249 129 ntBASIC2.83□□□□□ -1.96
GPC1P35052 MTND5P40-201ENST00000559945 246 ntBASIC2.83□□□□□ -1.96
GPC1P35052 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
GPC1P35052 MIR8055-201ENST00000610739 97 ntBASIC2.83□□□□□ -1.96
GPC1P35052 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
GPC1P35052 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
GPC1P35052 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
GPC1P35052 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
GPC1P35052 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
GPC1P35052 SNORA71.1-201ENST00000364523 117 ntBASIC2.82□□□□□ -1.96
GPC1P35052 RNU6-1237P-201ENST00000384777 107 ntBASIC2.82□□□□□ -1.96
GPC1P35052 MIR519C-201ENST00000385053 87 ntBASIC2.82□□□□□ -1.96
GPC1P35052 AC022018.1-201ENST00000430685 241 ntBASIC2.82□□□□□ -1.96
GPC1P35052 HMGN2P3-201ENST00000433603 273 ntBASIC2.82□□□□□ -1.96
GPC1P35052 HMGN2P5-201ENST00000436882 273 ntBASIC2.82□□□□□ -1.96
GPC1P35052 AL161932.1-201ENST00000437408 146 ntBASIC2.82□□□□□ -1.96
GPC1P35052 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.82□□□□□ -1.96
GPC1P35052 MIR8065-201ENST00000620577 100 ntBASIC2.82□□□□□ -1.96
GPC1P35052 AC007318.2-201ENST00000620999 243 ntBASIC2.82□□□□□ -1.96
GPC1P35052 AL513423.1-201ENST00000621695 132 ntBASIC2.82□□□□□ -1.96
GPC1P35052 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.82□□□□□ -1.96
GPC1P35052 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
GPC1P35052 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.81□□□□□ -1.96
GPC1P35052 SNORD38.2-201ENST00000384470 69 ntBASIC2.81□□□□□ -1.96
GPC1P35052 AC139453.2-201ENST00000487255 133 ntBASIC2.81□□□□□ -1.96
GPC1P35052 AC234781.5-201ENST00000508429 271 ntBASIC2.81□□□□□ -1.96
GPC1P35052 RN7SKP132-201ENST00000516001 208 ntBASIC2.81□□□□□ -1.96
GPC1P35052 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.81□□□□□ -1.96
GPC1P35052 AL513043.2-201ENST00000573941 143 ntBASIC2.81□□□□□ -1.96
GPC1P35052 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.81□□□□□ -1.96
GPC1P35052 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
GPC1P35052 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
GPC1P35052 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
GPC1P35052 AC073325.2-201ENST00000339545 159 ntBASIC2.8□□□□□ -1.96
GPC1P35052 MIR181B2-201ENST00000385004 89 ntBASIC2.8□□□□□ -1.96
GPC1P35052 SNORA48.2-201ENST00000390926 124 ntBASIC2.8□□□□□ -1.96
GPC1P35052 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.8□□□□□ -1.96
GPC1P35052 RNU7-26P-201ENST00000458980 63 ntBASIC2.8□□□□□ -1.96
GPC1P35052 AP004217.1-201ENST00000480579 346 ntBASIC2.8□□□□□ -1.96
GPC1P35052 RNU7-137P-201ENST00000516788 62 ntBASIC2.8□□□□□ -1.96
GPC1P35052 SNORA74.3-201ENST00000517108 154 ntBASIC2.8□□□□□ -1.96
GPC1P35052 AC012676.2-201ENST00000619258 186 ntBASIC2.8□□□□□ -1.96
GPC1P35052 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
GPC1P35052 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
GPC1P35052 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
GPC1P35052 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.8□□□□□ -1.96
GPC1P35052 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
GPC1P35052 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
GPC1P35052 SNORD115-37-201ENST00000363768 82 ntBASIC2.79□□□□□ -1.96
GPC1P35052 SNORA54-201ENST00000384281 123 ntBASIC2.79□□□□□ -1.96
GPC1P35052 RNU1-148P-201ENST00000384472 162 ntBASIC2.79□□□□□ -1.96
GPC1P35052 RNU6-613P-201ENST00000410412 108 ntBASIC2.79□□□□□ -1.96
GPC1P35052 RNU7-48P-201ENST00000458875 63 ntBASIC2.79□□□□□ -1.96
GPC1P35052 AC093729.1-201ENST00000513074 128 ntBASIC2.79□□□□□ -1.96
GPC1P35052 AC008885.1-201ENST00000514930 301 ntBASIC2.79□□□□□ -1.96
GPC1P35052 CYP3A52P-201ENST00000563326 91 ntBASIC2.79□□□□□ -1.96
GPC1P35052 MIR4712-201ENST00000583750 82 ntBASIC2.79□□□□□ -1.96
GPC1P35052 AC020891.4-201ENST00000605745 93 ntBASIC2.79□□□□□ -1.96
GPC1P35052 SCARNA4.1-201ENST00000628597 123 ntBASIC2.79□□□□□ -1.96
GPC1P35052 MIR6733-201ENST00000635723 61 ntBASIC2.79□□□□□ -1.96
GPC1P35052 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
GPC1P35052 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
GPC1P35052 Y_RNA.98-201ENST00000363109 102 ntBASIC2.78□□□□□ -1.96
GPC1P35052 SNORD114-10-201ENST00000363409 72 ntBASIC2.78□□□□□ -1.96
GPC1P35052 MIR128-1-201ENST00000384921 82 ntBASIC2.78□□□□□ -1.96
GPC1P35052 RNU6-602P-201ENST00000411155 105 ntBASIC2.78□□□□□ -1.96
GPC1P35052 snoU13.27-201ENST00000459278 104 ntBASIC2.78□□□□□ -1.96
GPC1P35052 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
GPC1P35052 Z97988.1-201ENST00000637697 135 ntBASIC2.78□□□□□ -1.96
GPC1P35052 AC131280.1-202ENST00000624067 4211 ntBASIC2.77□□□□□ -1.97
GPC1P35052 MIR1283-2-201ENST00000408621 87 ntBASIC2.77□□□□□ -1.97
GPC1P35052 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
GPC1P35052 AC099513.1-201ENST00000490423 301 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms