Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HOXC12P31275 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HOXC12P31275 RNU6-661P-201ENST00000362409 107 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 SNORA70.7-201ENST00000384159 133 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 RNU6-429P-201ENST00000384582 108 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HOXC12P31275 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 MTATP6P29-201ENST00000415057 132 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.11□□□□□ -2.07
HOXC12P31275 RNU6-919P-201ENST00000516731 104 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 AC022254.1-201ENST00000567857 235 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 MIR4713-201ENST00000582691 75 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 AC243994.1-201ENST00000618627 109 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 MIR1291-201ENST00000627649 87 ntBASIC2.11□□□□□ -2.07
HOXC12P31275 AC005336.3-201ENST00000623833 2679 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 Y_RNA.81-201ENST00000362997 102 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 RNA5SP99-201ENST00000364020 114 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 MIR548A1-201ENST00000385041 97 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 AL161935.2-201ENST00000414627 60 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 AL035461.1-201ENST00000421490 332 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HOXC12P31275 RPS29P29-201ENST00000456396 171 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 Y_RNA.649-201ENST00000459077 103 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 RNU2-13P-201ENST00000515909 113 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 RNU6-322P-201ENST00000516010 103 ntBASIC2.1□□□□□ -2.07
HOXC12P31275 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
HOXC12P31275 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 RNU7-164P-201ENST00000459221 62 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 SNORA31.4-201ENST00000516049 129 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.09□□□□□ -2.07
HOXC12P31275 MIR4305-201ENST00000583252 102 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 AC103810.6-201ENST00000606708 136 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 MIR4791-201ENST00000607666 84 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 AL137847.3-201ENST00000611521 109 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 MIR8074-201ENST00000615081 81 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
HOXC12P31275 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.09□□□□□ -2.07
HOXC12P31275 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
HOXC12P31275 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
HOXC12P31275 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
HOXC12P31275 RNU6-44P-201ENST00000384045 107 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 MIR520C-201ENST00000385005 87 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 RNA5SP247-201ENST00000411181 105 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 RNU7-45P-201ENST00000459460 63 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 RPL23AP42-201ENST00000471152 471 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 AC026436.1-201ENST00000510537 270 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 RNY4P20-201ENST00000516678 93 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 RNU7-53P-201ENST00000516705 60 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC12P31275 AC021613.1-201ENST00000623880 111 ntBASIC2.08□□□□□ -2.08
HOXC12P31275 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HOXC12P31275 Y_RNA.298-201ENST00000364960 107 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 SNORD116-21-201ENST00000384507 92 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 Y_RNA.537-201ENST00000384626 109 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 MIR653-201ENST00000385279 96 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 AL451046.2-201ENST00000403074 277 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 COX6CP6-201ENST00000490840 228 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 RNA5SP458-201ENST00000516188 119 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 RNU7-43P-201ENST00000516554 64 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 SNORA77B-201ENST00000578179 125 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 MIR4764-201ENST00000580680 88 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
HOXC12P31275 AC092881.1-201ENST00000638218 2733 ntBASIC2.06□□□□□ -2.08
HOXC12P31275 SNORA51.10-201ENST00000384418 136 ntBASIC2.06□□□□□ -2.08
HOXC12P31275 MIR759-201ENST00000390224 91 ntBASIC2.06□□□□□ -2.08
HOXC12P31275 RNA5SP489-201ENST00000410986 109 ntBASIC2.06□□□□□ -2.08
HOXC12P31275 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC12P31275 RNA5SP281-201ENST00000516504 135 ntBASIC2.06□□□□□ -2.08
HOXC12P31275 MIR3152-201ENST00000579801 74 ntBASIC2.06□□□□□ -2.08
HOXC12P31275 AC067747.1-201ENST00000608026 250 ntBASIC2.06□□□□□ -2.08
HOXC12P31275 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXC12P31275 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
HOXC12P31275 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HOXC12P31275 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HOXC12P31275 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXC12P31275 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC12P31275 SNORA24-201ENST00000384096 131 ntBASIC2.05□□□□□ -2.08
HOXC12P31275 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HOXC12P31275 AL023284.1-201ENST00000403956 276 ntBASIC2.05□□□□□ -2.08
HOXC12P31275 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
HOXC12P31275 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXC12P31275 RNU7-123P-201ENST00000515911 60 ntBASIC2.05□□□□□ -2.08
HOXC12P31275 MIR3683-201ENST00000580847 82 ntBASIC2.05□□□□□ -2.08
HOXC12P31275 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
HOXC12P31275 AC046143.2-201ENST00000609789 160 ntBASIC2.05□□□□□ -2.08
HOXC12P31275 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXC12P31275 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC12P31275 Y_RNA.198-201ENST00000364013 98 ntBASIC2.04□□□□□ -2.08
HOXC12P31275 HMGN2P23-201ENST00000456759 269 ntBASIC2.04□□□□□ -2.08
HOXC12P31275 RNU2-35P-201ENST00000516446 142 ntBASIC2.04□□□□□ -2.08
HOXC12P31275 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HOXC12P31275 Y_RNA.35-201ENST00000362601 101 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 RNU6-1319P-201ENST00000390855 104 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 RNU6-913P-201ENST00000390913 95 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 RNU6-747P-201ENST00000390928 104 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 RNU6-241P-201ENST00000391148 104 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 RNA5SP144-201ENST00000410846 116 ntBASIC2.03□□□□□ -2.08
HOXC12P31275 RNU6-177P-201ENST00000411257 104 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms