Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
SMPD1P17405 AL355297.2-201ENST00000604792 129 ntBASIC3.21□□□□□ -1.9
SMPD1P17405 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.21□□□□□ -1.9
SMPD1P17405 AC243994.1-201ENST00000618627 109 ntBASIC3.21□□□□□ -1.9
SMPD1P17405 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMPD1P17405 SNORD56.3-201ENST00000363507 71 ntBASIC3.2□□□□□ -1.9
SMPD1P17405 RNU1-112P-201ENST00000364401 164 ntBASIC3.2□□□□□ -1.9
SMPD1P17405 RNU6-649P-201ENST00000384463 107 ntBASIC3.2□□□□□ -1.9
SMPD1P17405 RNU7-48P-201ENST00000458875 63 ntBASIC3.2□□□□□ -1.9
SMPD1P17405 RN7SL442P-201ENST00000473804 320 ntBASIC3.2□□□□□ -1.9
SMPD1P17405 RNU7-79P-201ENST00000516082 62 ntBASIC3.2□□□□□ -1.9
SMPD1P17405 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SMPD1P17405 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
SMPD1P17405 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMPD1P17405 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMPD1P17405 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMPD1P17405 MTND4LP19-201ENST00000403051 166 ntBASIC3.19□□□□□ -1.9
SMPD1P17405 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
SMPD1P17405 SEM1P1-201ENST00000506694 209 ntBASIC3.19□□□□□ -1.9
SMPD1P17405 RNU7-137P-201ENST00000516788 62 ntBASIC3.19□□□□□ -1.9
SMPD1P17405 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.19□□□□□ -1.9
SMPD1P17405 AC105081.1-201ENST00000617727 106 ntBASIC3.19□□□□□ -1.9
SMPD1P17405 SNORA50A-202ENST00000629536 136 ntBASIC3.19□□□□□ -1.9
SMPD1P17405 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMPD1P17405 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMPD1P17405 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SMPD1P17405 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.18□□□□□ -1.9
SMPD1P17405 SNORA25.9-201ENST00000365087 128 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 Y_RNA.508-201ENST00000384502 114 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 MIR452-201ENST00000385020 85 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 MIR516B2-201ENST00000385190 85 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 MIR136-201ENST00000385207 82 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 RN7SL633P-201ENST00000488974 297 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 AC018868.1-201ENST00000491307 315 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.18□□□□□ -1.9
SMPD1P17405 RNU6-70P-201ENST00000516438 60 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 Y_RNA.681-201ENST00000516445 113 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 SNORD59.2-201ENST00000516873 68 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 AP001362.1-201ENST00000625165 124 ntBASIC3.18□□□□□ -1.9
SMPD1P17405 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMPD1P17405 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SMPD1P17405 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMPD1P17405 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMPD1P17405 RNU6-161P-201ENST00000363051 106 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 Y_RNA.354-201ENST00000365448 111 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 RNU6-1072P-201ENST00000384703 107 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 RNU6-443P-201ENST00000384780 107 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 U8.16-201ENST00000391279 133 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 AL138827.1-201ENST00000402666 306 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 HMGN1P33-201ENST00000432945 451 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 FGF7P7-201ENST00000514120 227 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 RNU6-687P-201ENST00000516443 89 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.17□□□□□ -1.9
SMPD1P17405 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 MIR8066-201ENST00000617280 78 ntBASIC3.17□□□□□ -1.9
SMPD1P17405 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SMPD1P17405 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SMPD1P17405 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMPD1P17405 MIR196B-201ENST00000384852 84 ntBASIC3.16□□□□□ -1.9
SMPD1P17405 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SMPD1P17405 SNORA11.4-201ENST00000408823 129 ntBASIC3.16□□□□□ -1.9
SMPD1P17405 RNU6-807P-201ENST00000516805 107 ntBASIC3.16□□□□□ -1.9
SMPD1P17405 MIR4796-201ENST00000580742 81 ntBASIC3.16□□□□□ -1.9
SMPD1P17405 AL512598.1-201ENST00000610158 273 ntBASIC3.16□□□□□ -1.9
SMPD1P17405 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.16□□□□□ -1.9
SMPD1P17405 MIR1297-201ENST00000637311 77 ntBASIC3.16□□□□□ -1.9
SMPD1P17405 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.16□□□□□ -1.9
SMPD1P17405 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SMPD1P17405 AL355596.1-201ENST00000565399 3996 ntBASIC3.15□□□□□ -1.9
SMPD1P17405 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMPD1P17405 AL034345.1-201ENST00000407768 123 ntBASIC3.15□□□□□ -1.91
SMPD1P17405 RNA5SP508-201ENST00000411327 119 ntBASIC3.15□□□□□ -1.91
SMPD1P17405 SNORA31.10-201ENST00000516482 106 ntBASIC3.15□□□□□ -1.91
SMPD1P17405 MIR548AR-201ENST00000582191 57 ntBASIC3.15□□□□□ -1.91
SMPD1P17405 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SMPD1P17405 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SMPD1P17405 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.14□□□□□ -1.91
SMPD1P17405 HSBP1P2-201ENST00000299671 229 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 RNA5SP493-201ENST00000364115 91 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 MIR9-1-201ENST00000385198 89 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 AC023141.11-201ENST00000508864 202 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 RNU7-12P-201ENST00000516030 62 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 RNU6-1108P-201ENST00000516308 104 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 RNA5SP168-201ENST00000516642 112 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 MIR8055-201ENST00000610739 97 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 MIR8065-201ENST00000620577 100 ntBASIC3.14□□□□□ -1.91
SMPD1P17405 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMPD1P17405 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMPD1P17405 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SMPD1P17405 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMPD1P17405 RNU6-859P-201ENST00000362728 107 ntBASIC3.13□□□□□ -1.91
SMPD1P17405 RNU6-800P-201ENST00000384473 103 ntBASIC3.13□□□□□ -1.91
SMPD1P17405 Y_RNA.537-201ENST00000384626 109 ntBASIC3.13□□□□□ -1.91
SMPD1P17405 SNORD28B-201ENST00000390993 75 ntBASIC3.13□□□□□ -1.91
SMPD1P17405 RNA5SP21-201ENST00000410917 96 ntBASIC3.13□□□□□ -1.91
SMPD1P17405 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.13□□□□□ -1.91
SMPD1P17405 snoU13.16-201ENST00000459350 104 ntBASIC3.13□□□□□ -1.91
SMPD1P17405 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms