Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 RNU1-42P-201ENST00000364033 160 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 SNORA24-201ENST00000384096 131 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 SNORA27-201ENST00000384323 126 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 MIR520C-201ENST00000385005 87 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 MIR517C-201ENST00000385103 95 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 snoU13.26-201ENST00000459452 105 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 RPL30P7-201ENST00000479312 323 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 RNU6-346P-201ENST00000516288 111 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 MIR3664-201ENST00000579074 99 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 MIR3133-201ENST00000583157 78 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 MIR6715A-201ENST00000615929 79 ntBASIC1.3□□□□□ -2.2
KDM4BO94953 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
KDM4BO94953 Y_RNA.488-201ENST00000384403 102 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 Y_RNA.537-201ENST00000384626 109 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 MIR513C-201ENST00000401352 84 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 AL603908.1-201ENST00000406098 201 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 AC107297.1-201ENST00000459991 176 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 RNA5SP236-201ENST00000516169 116 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 RNU6-1149P-201ENST00000516810 97 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 RNU2-60P-201ENST00000517290 128 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 SNORD53B-201ENST00000577887 78 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 AC008133.2-201ENST00000624540 351 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 MTND5P32-201ENST00000560711 1802 ntBASIC1.29□□□□□ -2.2
KDM4BO94953 RNU6-774P-201ENST00000363238 107 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 Y_RNA.584-201ENST00000391090 114 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 MIR548M-201ENST00000408260 86 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 MIR1261-201ENST00000408659 82 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 RNU7-96P-201ENST00000459535 64 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 RPS29P24-201ENST00000486345 171 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 SNORA25.12-201ENST00000516202 82 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 MIR3192-201ENST00000584920 77 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 MIR4791-201ENST00000607666 84 ntBASIC1.28□□□□□ -2.2
KDM4BO94953 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
KDM4BO94953 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
KDM4BO94953 Y_RNA.120-201ENST00000363304 110 ntBASIC1.27□□□□□ -2.21
KDM4BO94953 RNU6-1067P-201ENST00000384752 107 ntBASIC1.27□□□□□ -2.21
KDM4BO94953 MIR570-201ENST00000384917 97 ntBASIC1.27□□□□□ -2.21
KDM4BO94953 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
KDM4BO94953 RNU6-998P-201ENST00000515894 101 ntBASIC1.27□□□□□ -2.21
KDM4BO94953 RNU7-41P-201ENST00000515917 61 ntBASIC1.27□□□□□ -2.21
KDM4BO94953 AC243994.1-201ENST00000618627 109 ntBASIC1.27□□□□□ -2.21
KDM4BO94953 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
KDM4BO94953 SNORD50.2-201ENST00000365465 70 ntBASIC1.26□□□□□ -2.21
KDM4BO94953 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
KDM4BO94953 SNORA51.10-201ENST00000384418 136 ntBASIC1.26□□□□□ -2.21
KDM4BO94953 Y_RNA.568-201ENST00000384742 113 ntBASIC1.26□□□□□ -2.21
KDM4BO94953 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
KDM4BO94953 SNORA67.6-201ENST00000391093 99 ntBASIC1.26□□□□□ -2.21
KDM4BO94953 RNU6-460P-201ENST00000391158 108 ntBASIC1.26□□□□□ -2.21
KDM4BO94953 RNU6-426P-201ENST00000516464 97 ntBASIC1.26□□□□□ -2.21
KDM4BO94953 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.26□□□□□ -2.21
KDM4BO94953 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.26□□□□□ -2.21
KDM4BO94953 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.25□□□□□ -2.21
KDM4BO94953 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 RNA5SP48-201ENST00000363969 126 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 Y_RNA.343-201ENST00000365354 112 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 Y_RNA.351-201ENST00000365436 96 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 Y_RNA.420-201ENST00000384043 110 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 SNORA67.5-201ENST00000391036 107 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 AL035398.1-201ENST00000430869 322 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 RNU7-73P-201ENST00000458743 63 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 snoU13.25-201ENST00000458945 104 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 RNU7-80P-201ENST00000459562 61 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 RNU6-548P-201ENST00000517083 115 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 AC091932.4-201ENST00000623386 200 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 AP001340.1-201ENST00000624405 217 ntBASIC1.25□□□□□ -2.21
KDM4BO94953 RNA5SP190-201ENST00000365222 118 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 RNU6-187P-201ENST00000384139 106 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 Y_RNA.454-201ENST00000384224 113 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 AL603914.1-201ENST00000401964 204 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 MIR1289-2-201ENST00000408360 111 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 AL354695.1-201ENST00000427935 228 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.24□□□□□ -2.21
KDM4BO94953 RPL39P39-201ENST00000455840 151 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 SNORA31.4-201ENST00000516049 129 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 Y_RNA.686-201ENST00000516548 134 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 RNU7-53P-201ENST00000516705 60 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 MIR4251-201ENST00000635819 61 ntBASIC1.24□□□□□ -2.21
KDM4BO94953 AC010332.2-201ENST00000613083 1904 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 SNORA25.8-201ENST00000364831 128 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 MIR613-201ENST00000385248 95 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 MTATP6P21-201ENST00000440681 189 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 AL392103.1-201ENST00000447000 198 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 RNU7-67P-201ENST00000459003 62 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 RNU2-11P-201ENST00000459191 187 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 snoU13.16-201ENST00000459350 104 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 RNU6-958P-201ENST00000516995 106 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 AP003716.2-201ENST00000528260 108 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
KDM4BO94953 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
KDM4BO94953 RNU6-60P-201ENST00000364792 103 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 RNU1-133P-201ENST00000364867 167 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 RNU6-915P-201ENST00000364943 103 ntBASIC1.22□□□□□ -2.21
KDM4BO94953 SNORA20-201ENST00000384662 132 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms