Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 Y_RNA.809-201ENST00000516058 95 ntBASIC4.49□□□□□ -1.69
NPM3O75607 DLEU2_3.1-201ENST00000620005 73 ntBASIC4.49□□□□□ -1.69
NPM3O75607 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
NPM3O75607 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.48□□□□□ -1.69
NPM3O75607 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
NPM3O75607 SNORD93-201ENST00000408813 74 ntBASIC4.48□□□□□ -1.69
NPM3O75607 RNA5SP100-201ENST00000410903 110 ntBASIC4.48□□□□□ -1.69
NPM3O75607 RNA5SP59-201ENST00000410922 110 ntBASIC4.48□□□□□ -1.69
NPM3O75607 CYCSP4-201ENST00000429682 331 ntBASIC4.48□□□□□ -1.69
NPM3O75607 5S_rRNA.3-201ENST00000517021 110 ntBASIC4.48□□□□□ -1.69
NPM3O75607 RNU2-19P-201ENST00000517288 84 ntBASIC4.48□□□□□ -1.69
NPM3O75607 MIR4644-201ENST00000579929 84 ntBASIC4.48□□□□□ -1.69
NPM3O75607 AL627230.6-201ENST00000611129 280 ntBASIC4.48□□□□□ -1.69
NPM3O75607 5S_rRNA.19-201ENST00000612131 110 ntBASIC4.48□□□□□ -1.69
NPM3O75607 5S_rRNA.18-201ENST00000621941 110 ntBASIC4.48□□□□□ -1.69
NPM3O75607 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
NPM3O75607 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.48□□□□□ -1.69
NPM3O75607 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.48□□□□□ -1.69
NPM3O75607 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPM3O75607 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPM3O75607 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPM3O75607 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPM3O75607 RNU6-1260P-201ENST00000362944 107 ntBASIC4.47□□□□□ -1.69
NPM3O75607 SNORD115-22-201ENST00000364456 82 ntBASIC4.47□□□□□ -1.69
NPM3O75607 RNU6-203P-201ENST00000384038 104 ntBASIC4.47□□□□□ -1.69
NPM3O75607 MIR183-201ENST00000384958 110 ntBASIC4.47□□□□□ -1.69
NPM3O75607 MIR1302-7-201ENST00000408841 72 ntBASIC4.47□□□□□ -1.69
NPM3O75607 AL137849.1-201ENST00000604767 169 ntBASIC4.47□□□□□ -1.69
NPM3O75607 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
NPM3O75607 U6.81-201ENST00000612550 106 ntBASIC4.47□□□□□ -1.69
NPM3O75607 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPM3O75607 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NPM3O75607 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NPM3O75607 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NPM3O75607 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
NPM3O75607 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
NPM3O75607 AC110620.1-201ENST00000416042 228 ntBASIC4.46□□□□□ -1.7
NPM3O75607 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.46□□□□□ -1.7
NPM3O75607 TRAJ51-201ENST00000504127 63 ntBASIC4.46□□□□□ -1.7
NPM3O75607 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.46□□□□□ -1.7
NPM3O75607 MIR4696-201ENST00000581431 70 ntBASIC4.46□□□□□ -1.7
NPM3O75607 AC020914.4-201ENST00000597690 277 ntBASIC4.46□□□□□ -1.7
NPM3O75607 AL591424.2-201ENST00000617023 128 ntBASIC4.46□□□□□ -1.7
NPM3O75607 AC069503.3-201ENST00000618674 145 ntBASIC4.46□□□□□ -1.7
NPM3O75607 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NPM3O75607 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
NPM3O75607 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPM3O75607 SNORA24B-201ENST00000384176 131 ntBASIC4.45□□□□□ -1.7
NPM3O75607 SNORA31.17-201ENST00000516953 127 ntBASIC4.45□□□□□ -1.7
NPM3O75607 MIR3140-201ENST00000583685 90 ntBASIC4.45□□□□□ -1.7
NPM3O75607 U3.45-201ENST00000607547 219 ntBASIC4.45□□□□□ -1.7
NPM3O75607 U6.105-201ENST00000637379 88 ntBASIC4.45□□□□□ -1.7
NPM3O75607 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPM3O75607 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NPM3O75607 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPM3O75607 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC4.44□□□□□ -1.7
NPM3O75607 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPM3O75607 AC073325.2-201ENST00000339545 159 ntBASIC4.44□□□□□ -1.7
NPM3O75607 MIR34B-201ENST00000385076 84 ntBASIC4.44□□□□□ -1.7
NPM3O75607 RNA5SP424-201ENST00000390988 115 ntBASIC4.44□□□□□ -1.7
NPM3O75607 Y_RNA.588-201ENST00000391254 102 ntBASIC4.44□□□□□ -1.7
NPM3O75607 MIR5089-201ENST00000580047 84 ntBASIC4.44□□□□□ -1.7
NPM3O75607 MIR3192-201ENST00000584920 77 ntBASIC4.44□□□□□ -1.7
NPM3O75607 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NPM3O75607 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.43□□□□□ -1.7
NPM3O75607 RNA5SP259-201ENST00000365541 109 ntBASIC4.43□□□□□ -1.7
NPM3O75607 MIR194-1-201ENST00000384892 85 ntBASIC4.43□□□□□ -1.7
NPM3O75607 RPS29P4-201ENST00000414733 161 ntBASIC4.43□□□□□ -1.7
NPM3O75607 UBBP3-201ENST00000445497 241 ntBASIC4.43□□□□□ -1.7
NPM3O75607 RN7SL293P-201ENST00000481765 281 ntBASIC4.43□□□□□ -1.7
NPM3O75607 RN7SL274P-201ENST00000492268 272 ntBASIC4.43□□□□□ -1.7
NPM3O75607 MIR7975-201ENST00000619350 68 ntBASIC4.43□□□□□ -1.7
NPM3O75607 GS1-279B7.1-204ENST00000641809 378 ntBASIC4.43□□□□□ -1.7
NPM3O75607 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPM3O75607 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPM3O75607 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NPM3O75607 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPM3O75607 RNU6-403P-201ENST00000363163 104 ntBASIC4.42□□□□□ -1.7
NPM3O75607 SNORA25.3-201ENST00000363205 127 ntBASIC4.42□□□□□ -1.7
NPM3O75607 SNORD113.1-201ENST00000363280 73 ntBASIC4.42□□□□□ -1.7
NPM3O75607 AL138878.1-201ENST00000405131 347 ntBASIC4.42□□□□□ -1.7
NPM3O75607 MIR514B-201ENST00000516774 80 ntBASIC4.42□□□□□ -1.7
NPM3O75607 MIR3922-201ENST00000585192 84 ntBASIC4.42□□□□□ -1.7
NPM3O75607 AC007179.3-201ENST00000604976 235 ntBASIC4.42□□□□□ -1.7
NPM3O75607 AC012314.7-201ENST00000619693 93 ntBASIC4.42□□□□□ -1.7
NPM3O75607 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPM3O75607 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.42□□□□□ -1.7
NPM3O75607 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NPM3O75607 AC079150.2-201ENST00000443733 78 ntBASIC4.41□□□□□ -1.7
NPM3O75607 MIR18B-201ENST00000454574 71 ntBASIC4.41□□□□□ -1.7
NPM3O75607 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPM3O75607 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NPM3O75607 MIR377-201ENST00000362145 69 ntBASIC4.4□□□□□ -1.71
NPM3O75607 Y_RNA.56-201ENST00000362798 112 ntBASIC4.4□□□□□ -1.71
NPM3O75607 SNORD116-24-201ENST00000384549 92 ntBASIC4.4□□□□□ -1.71
NPM3O75607 SNORA11.1-201ENST00000408133 129 ntBASIC4.4□□□□□ -1.71
NPM3O75607 AP000553.6-201ENST00000641242 118 ntBASIC4.4□□□□□ -1.71
NPM3O75607 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.4□□□□□ -1.71
NPM3O75607 AL606490.4-201ENST00000423117 127 ntBASIC4.39□□□□□ -1.71
NPM3O75607 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms