Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RNU6-978P-201ENST00000364371 103 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 RNU6-643P-201ENST00000384018 107 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 SNORA1-201ENST00000384107 130 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 SNORA27-201ENST00000384323 126 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 Y_RNA.476-201ENST00000384347 108 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 Y_RNA.515-201ENST00000384535 112 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
ZNF253O75346 SNORD77.3-201ENST00000391113 65 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 SNORA11.2-201ENST00000408318 127 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.83□□□□□ -2.28
ZNF253O75346 RNU7-90P-201ENST00000459216 62 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 snoU13.16-201ENST00000459350 104 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 RPS29P24-201ENST00000486345 171 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 AC015712.3-201ENST00000559380 164 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 AL353997.5-201ENST00000618886 171 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 AL353770.2-201ENST00000620024 78 ntBASIC0.83□□□□□ -2.28
ZNF253O75346 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.82□□□□□ -2.28
ZNF253O75346 RNU6-1020P-201ENST00000363684 107 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 Y_RNA.274-201ENST00000364714 101 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 RNU6-1292P-201ENST00000383856 107 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 RNU6-1189P-201ENST00000383958 107 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 Y_RNA.412-201ENST00000384001 104 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 Y_RNA.552-201ENST00000384665 112 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 RNU6-613P-201ENST00000410412 108 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 RNU7-73P-201ENST00000458743 63 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 RNU7-40P-201ENST00000516397 64 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 SNORD116-25-201ENST00000516517 92 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 MRPS18CP4-201ENST00000535821 231 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 MIR378D2-201ENST00000580636 98 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 HSPE1P19-201ENST00000603327 295 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 AC078938.1-201ENST00000620993 318 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 U6.106-201ENST00000636360 105 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
ZNF253O75346 RNU6-47P-201ENST00000383866 107 ntBASIC0.81□□□□□ -2.28
ZNF253O75346 Y_RNA.440-201ENST00000384120 114 ntBASIC0.81□□□□□ -2.28
ZNF253O75346 RNU7-96P-201ENST00000459535 64 ntBASIC0.81□□□□□ -2.28
ZNF253O75346 RNU6-998P-201ENST00000515894 101 ntBASIC0.81□□□□□ -2.28
ZNF253O75346 MIR2115-201ENST00000516657 100 ntBASIC0.81□□□□□ -2.28
ZNF253O75346 MIR5197-201ENST00000583721 112 ntBASIC0.81□□□□□ -2.28
ZNF253O75346 MIR6516-201ENST00000630554 81 ntBASIC0.81□□□□□ -2.28
ZNF253O75346 MIR376A2-201ENST00000636782 80 ntBASIC0.81□□□□□ -2.28
ZNF253O75346 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.8□□□□□ -2.28
ZNF253O75346 MIR377-201ENST00000362145 69 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 Y_RNA.233-201ENST00000364407 101 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 MT-TN-201ENST00000387400 73 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 AC108667.1-201ENST00000428618 249 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 RNU7-67P-201ENST00000459003 62 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 RNU7-53P-201ENST00000516705 60 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 RNU6-388P-201ENST00000517012 105 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 RNU6-389P-201ENST00000517048 105 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.8□□□□□ -2.28
ZNF253O75346 MIR4431-201ENST00000579990 94 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 MIR3129-201ENST00000581095 76 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 AL157834.3-201ENST00000615543 103 ntBASIC0.8□□□□□ -2.28
ZNF253O75346 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
ZNF253O75346 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
ZNF253O75346 RNU6-654P-201ENST00000364373 107 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 RNU6-312P-201ENST00000364629 107 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 RNU6-200P-201ENST00000364743 107 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 Y_RNA.297-201ENST00000364950 91 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 RNU6-396P-201ENST00000365369 105 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 AL035398.1-201ENST00000430869 322 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 Y_RNA.644-201ENST00000459006 113 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 Y_RNA.674-201ENST00000516362 113 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 Y_RNA.700-201ENST00000516806 100 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 AC072026.1-201ENST00000605023 201 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 AC012676.2-201ENST00000619258 186 ntBASIC0.79□□□□□ -2.28
ZNF253O75346 AL391516.1-201ENST00000554380 2449 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
ZNF253O75346 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 RNU6-597P-201ENST00000365620 102 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 MIR624-201ENST00000385217 97 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 RNU6-913P-201ENST00000390913 95 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 AP1B1P2-201ENST00000416196 106 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 RNU6-958P-201ENST00000516995 106 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 AC036111.3-201ENST00000526389 112 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
ZNF253O75346 AC131055.1-201ENST00000584626 316 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 MIR4781-201ENST00000585250 76 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 AC106800.4-201ENST00000614905 153 ntBASIC0.78□□□□□ -2.28
ZNF253O75346 Y_RNA.257-201ENST00000364596 102 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 MIR548I3-201ENST00000408378 149 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 RNA5SP127-201ENST00000411051 133 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 BTF3P4-201ENST00000418852 495 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 AL138752.1-201ENST00000452964 351 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 SNORD124-201ENST00000459577 104 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 RPL39P28-201ENST00000465655 155 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 AC005840.1-201ENST00000498412 377 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 RNU6-138P-201ENST00000515952 107 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 RNU6-1219P-201ENST00000516143 112 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 MIR4264-201ENST00000583520 66 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 AL020996.3-201ENST00000606617 222 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 MIR8055-201ENST00000610739 97 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 MIR6078-201ENST00000611069 100 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 Z97988.1-201ENST00000637697 135 ntBASIC0.77□□□□□ -2.29
ZNF253O75346 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms