Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC008133.2-201ENST00000624540 351 ntBASIC1.83□□□□□ -2.12
KDM1AO60341 RNU1-133P-201ENST00000364867 167 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 MIR539-201ENST00000365690 78 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 SNORA24-201ENST00000384096 131 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 Y_RNA.537-201ENST00000384626 109 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 RNU6-997P-201ENST00000384725 107 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 RPS29P29-201ENST00000456396 171 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 MIR3937-201ENST00000580135 106 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 AL022345.2-201ENST00000606307 135 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 MIR4791-201ENST00000607666 84 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KDM1AO60341 AC243994.1-201ENST00000618627 109 ntBASIC1.82□□□□□ -2.12
KDM1AO60341 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KDM1AO60341 MIR570-201ENST00000384917 97 ntBASIC1.81□□□□□ -2.12
KDM1AO60341 AL035398.1-201ENST00000430869 322 ntBASIC1.81□□□□□ -2.12
KDM1AO60341 AC027119.1-201ENST00000440877 241 ntBASIC1.81□□□□□ -2.12
KDM1AO60341 Y_RNA.651-201ENST00000459380 103 ntBASIC1.81□□□□□ -2.12
KDM1AO60341 RNU7-53P-201ENST00000516705 60 ntBASIC1.81□□□□□ -2.12
KDM1AO60341 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KDM1AO60341 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
KDM1AO60341 MIR4298-201ENST00000584380 73 ntBASIC1.81□□□□□ -2.12
KDM1AO60341 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.81□□□□□ -2.12
KDM1AO60341 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.81□□□□□ -2.12
KDM1AO60341 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.81□□□□□ -2.12
KDM1AO60341 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
KDM1AO60341 MIR342-201ENST00000362212 99 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 RNU6-508P-201ENST00000363231 103 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 RNU6-309P-201ENST00000364573 106 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 SNORD113-1-201ENST00000365321 69 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 SNORA51.10-201ENST00000384418 136 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 RNU7-67P-201ENST00000459003 62 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 RNU6-970P-201ENST00000516312 107 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 RNU6-971P-201ENST00000516920 106 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
KDM1AO60341 AL596211.1-201ENST00000569873 2277 ntBASIC1.8□□□□□ -2.12
KDM1AO60341 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KDM1AO60341 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 MIR504-201ENST00000385065 83 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 RNU2-11P-201ENST00000459191 187 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 RPL30P7-201ENST00000479312 323 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 RNU5E-3P-201ENST00000515913 68 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 RNU6-113P-201ENST00000516653 101 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 RNU6-295P-201ENST00000516901 104 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 MIR3121-201ENST00000579680 77 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 MIR4422-201ENST00000581938 83 ntBASIC1.79□□□□□ -2.12
KDM1AO60341 MIR302B-201ENST00000362188 73 ntBASIC1.78□□□□□ -2.12
KDM1AO60341 RNA5SP48-201ENST00000363969 126 ntBASIC1.78□□□□□ -2.12
KDM1AO60341 Y_RNA.280-201ENST00000364765 112 ntBASIC1.78□□□□□ -2.12
KDM1AO60341 Y_RNA.294-201ENST00000364916 102 ntBASIC1.78□□□□□ -2.12
KDM1AO60341 RNU1-98P-201ENST00000458992 160 ntBASIC1.78□□□□□ -2.12
KDM1AO60341 RNU6-1211P-201ENST00000459179 105 ntBASIC1.78□□□□□ -2.12
KDM1AO60341 RNU7-41P-201ENST00000515917 61 ntBASIC1.78□□□□□ -2.12
KDM1AO60341 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
KDM1AO60341 AL157777.2-201ENST00000258070 137 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 RNY1P6-201ENST00000384193 109 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 RNU6-959P-201ENST00000384671 107 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 SNORA19-201ENST00000384737 128 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 U8.13-201ENST00000390842 128 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 SNORA26.9-201ENST00000391322 122 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 RNU7-73P-201ENST00000458743 63 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 RNA5SP445-201ENST00000515889 115 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 RNU6-958P-201ENST00000516995 106 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 MIR3618-201ENST00000580330 88 ntBASIC1.77□□□□□ -2.13
KDM1AO60341 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
KDM1AO60341 Y_RNA.114-201ENST00000363265 113 ntBASIC1.76□□□□□ -2.13
KDM1AO60341 SNORA40.18-201ENST00000391200 128 ntBASIC1.76□□□□□ -2.13
KDM1AO60341 RNU1-78P-201ENST00000391248 165 ntBASIC1.76□□□□□ -2.13
KDM1AO60341 RPL39P39-201ENST00000455840 151 ntBASIC1.76□□□□□ -2.13
KDM1AO60341 AL096861.1-201ENST00000610899 123 ntBASIC1.76□□□□□ -2.13
KDM1AO60341 MIR4251-201ENST00000635819 61 ntBASIC1.76□□□□□ -2.13
KDM1AO60341 Y_RNA.218-201ENST00000364218 104 ntBASIC1.75□□□□□ -2.13
KDM1AO60341 RPS27P16-201ENST00000425758 201 ntBASIC1.75□□□□□ -2.13
KDM1AO60341 snoU13.16-201ENST00000459350 104 ntBASIC1.75□□□□□ -2.13
KDM1AO60341 SNRPGP19-201ENST00000603826 189 ntBASIC1.75□□□□□ -2.13
KDM1AO60341 RNU6-349P-201ENST00000362402 107 ntBASIC1.74□□□□□ -2.13
KDM1AO60341 RNU6-647P-201ENST00000364243 107 ntBASIC1.74□□□□□ -2.13
KDM1AO60341 RNU6-690P-201ENST00000365242 106 ntBASIC1.74□□□□□ -2.13
KDM1AO60341 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.74□□□□□ -2.13
KDM1AO60341 AL158147.1-201ENST00000443970 75 ntBASIC1.74□□□□□ -2.13
KDM1AO60341 AL512310.8-201ENST00000550183 120 ntBASIC1.74□□□□□ -2.13
KDM1AO60341 MIR3664-201ENST00000579074 99 ntBASIC1.74□□□□□ -2.13
KDM1AO60341 MIR3192-201ENST00000584920 77 ntBASIC1.74□□□□□ -2.13
KDM1AO60341 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.74□□□□□ -2.13
KDM1AO60341 RNU6-80P-201ENST00000384195 107 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 RNU6-1117P-201ENST00000384525 104 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 RNU6-913P-201ENST00000390913 95 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.73□□□□□ -2.13
KDM1AO60341 SNORA31.4-201ENST00000516049 129 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 RNU6-240P-201ENST00000516098 97 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 RNU6-947P-201ENST00000516264 106 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 AC104984.5-201ENST00000586878 94 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 AC108081.1-201ENST00000604358 221 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 AL020996.3-201ENST00000606617 222 ntBASIC1.73□□□□□ -2.13
KDM1AO60341 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms