Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-625P-201ENST00000459412 107 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 RNU6-1114P-201ENST00000516022 107 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-2.03□□□□□ -2.73
CHD1O14646 AC007671.2-201ENST00000637344 619 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 MIR302B-201ENST00000362188 73 ntBASIC-2.04□□□□□ -2.74
CHD1O14646 Y_RNA.7-201ENST00000362352 102 ntBASIC-2.04□□□□□ -2.74
CHD1O14646 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.04□□□□□ -2.74
CHD1O14646 MTND1P27-201ENST00000451117 902 ntBASIC-2.04□□□□□ -2.74
CHD1O14646 PCMTD1P1-201ENST00000455560 355 ntBASIC-2.04□□□□□ -2.74
CHD1O14646 Y_RNA.221-201ENST00000364248 96 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 MIR3920-201ENST00000581751 86 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 RNU7-10P-201ENST00000607194 63 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 HULC.1-201ENST00000612720 240 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 AL163152.1-201ENST00000642001 374 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 AL589826.1-201ENST00000340697 249 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 MTCO2P16-201ENST00000436962 677 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 AC004467.1-201ENST00000615678 330 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 MIR6502-201ENST00000617296 76 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 AC009161.2-201ENST00000624626 138 ntBASIC-2.05□□□□□ -2.74
CHD1O14646 RNU6-905P-201ENST00000384434 107 ntBASIC-2.06□□□□□ -2.74
CHD1O14646 MIR548I3-201ENST00000408378 149 ntBASIC-2.06□□□□□ -2.74
CHD1O14646 TPTE2P5-203ENST00000458118 728 ntBASIC-2.06□□□□□ -2.74
CHD1O14646 RNU7-25P-201ENST00000516544 62 ntBASIC-2.06□□□□□ -2.74
CHD1O14646 AL442663.2-201ENST00000554385 511 ntBASIC-2.06□□□□□ -2.74
CHD1O14646 MIR6717-201ENST00000622747 73 ntBASIC-2.06□□□□□ -2.74
CHD1O14646 RNU4-92P-201ENST00000363783 136 ntBASIC-2.07□□□□□ -2.74
CHD1O14646 SNORD18.1-201ENST00000363807 70 ntBASIC-2.07□□□□□ -2.74
CHD1O14646 SNORD72-201ENST00000390994 80 ntBASIC-2.07□□□□□ -2.74
CHD1O14646 MIR889-201ENST00000401280 79 ntBASIC-2.07□□□□□ -2.74
CHD1O14646 MIR548H1-201ENST00000408610 102 ntBASIC-2.07□□□□□ -2.74
CHD1O14646 RNU6-276P-201ENST00000516114 96 ntBASIC-2.07□□□□□ -2.74
CHD1O14646 RNU6-189P-201ENST00000516120 101 ntBASIC-2.07□□□□□ -2.74
CHD1O14646 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-2.07□□□□□ -2.74
CHD1O14646 AC006927.3-201ENST00000638789 384 ntBASIC-2.07□□□□□ -2.74
CHD1O14646 RNU6-653P-201ENST00000363074 106 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 RNA5SP133-201ENST00000363368 119 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 RNU6-931P-201ENST00000363850 107 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 RNU6-973P-201ENST00000364690 107 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 RNU6-1200P-201ENST00000384162 107 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 SNORA26.6-201ENST00000391256 115 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 MIR5704-201ENST00000584029 77 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 MIR5692C1-201ENST00000585309 91 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-2.08□□□□□ -2.74
CHD1O14646 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-2.08□□□□□ -2.74
CHD1O14646 RNY1P13-201ENST00000365030 105 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 RNU6-1201P-201ENST00000384227 107 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 RNU4-70P-201ENST00000384579 139 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 RNU6-1001P-201ENST00000411265 100 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 EIF1P2-201ENST00000428233 350 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 AC098614.3-201ENST00000438957 440 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 AC244090.1-201ENST00000441884 93 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-2.08□□□□□ -2.74
CHD1O14646 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 SNORA40.17-201ENST00000517256 115 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 AC022441.3-201ENST00000605737 136 ntBASIC-2.08□□□□□ -2.74
CHD1O14646 SNORD115-30-201ENST00000364117 82 ntBASIC-2.09□□□□□ -2.74
CHD1O14646 RNY4P34-201ENST00000364779 95 ntBASIC-2.09□□□□□ -2.74
CHD1O14646 AL606923.1-201ENST00000406616 190 ntBASIC-2.09□□□□□ -2.74
CHD1O14646 RNU6-710P-201ENST00000410424 105 ntBASIC-2.09□□□□□ -2.74
CHD1O14646 RNU6-1012P-201ENST00000516606 109 ntBASIC-2.09□□□□□ -2.74
CHD1O14646 AP003357.1-201ENST00000604497 148 ntBASIC-2.09□□□□□ -2.74
CHD1O14646 AL607023.1-201ENST00000620045 248 ntBASIC-2.09□□□□□ -2.74
CHD1O14646 RNU5E-5P-201ENST00000365379 116 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 SNORD116-9-201ENST00000384000 95 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 SNORD116-3-201ENST00000384287 95 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 SNORD116-8-201ENST00000384365 95 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 SNORD116-7-201ENST00000384404 95 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 SNORD116-5-201ENST00000384462 95 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 RNU6-576P-201ENST00000390854 102 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 RNU6-1086P-201ENST00000410930 100 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 RNU2-61P-201ENST00000411069 191 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 RNU6-693P-201ENST00000516134 107 ntBASIC-2.1□□□□□ -2.75
CHD1O14646 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-2.1□□□□□ -2.75
CHD1O14646 MIR342-201ENST00000362212 99 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 AL031003.1-201ENST00000404229 172 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 CEP57L1P1-201ENST00000430943 1201 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 AC093423.1-201ENST00000440817 142 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 USP9YP23-201ENST00000455085 407 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 MIR548AE1-201ENST00000583292 70 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 RNU6-597P-201ENST00000365620 102 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 RNU6-429P-201ENST00000384582 108 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 MIR617-201ENST00000385030 97 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 MTCYBP8-201ENST00000422855 651 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 CYCSP46-201ENST00000423569 204 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 RNU6-998P-201ENST00000515894 101 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 SNORA19.3-201ENST00000516165 130 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 RNU6-436P-201ENST00000516171 114 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 Y_RNA.706-201ENST00000516933 99 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 MIR4999-201ENST00000585029 91 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 RN7SKP299-201ENST00000606679 301 ntBASIC-2.11□□□□□ -2.75
CHD1O14646 RNU6-660P-201ENST00000364566 109 ntBASIC-2.12□□□□□ -2.75
CHD1O14646 SNORD114-17-201ENST00000364699 75 ntBASIC-2.12□□□□□ -2.75
CHD1O14646 Y_RNA.341-201ENST00000365341 102 ntBASIC-2.12□□□□□ -2.75
CHD1O14646 Y_RNA.358-201ENST00000365491 99 ntBASIC-2.12□□□□□ -2.75
CHD1O14646 ACA59.1-201ENST00000515966 143 ntBASIC-2.12□□□□□ -2.75
CHD1O14646 RNU6-1190P-201ENST00000410811 104 ntBASIC-2.13□□□□□ -2.75
CHD1O14646 RNU6-1170P-201ENST00000515974 106 ntBASIC-2.13□□□□□ -2.75
CHD1O14646 RNU6-759P-201ENST00000516740 103 ntBASIC-2.13□□□□□ -2.75
CHD1O14646 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.14□□□□□ -2.75
CHD1O14646 SNORD115-35-201ENST00000365122 82 ntBASIC-2.14□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms