Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RCCD1A6NED2 RNA5SP274-201ENST00000410484 108 ntBASIC3.21□□□□□ -1.9
RCCD1A6NED2 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
RCCD1A6NED2 SNORA70.24-201ENST00000517233 118 ntBASIC3.21□□□□□ -1.9
RCCD1A6NED2 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RCCD1A6NED2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RCCD1A6NED2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RCCD1A6NED2 RNU6-112P-201ENST00000363599 104 ntBASIC3.2□□□□□ -1.9
RCCD1A6NED2 Y_RNA.168-201ENST00000363740 102 ntBASIC3.2□□□□□ -1.9
RCCD1A6NED2 SNORA54-201ENST00000384281 123 ntBASIC3.2□□□□□ -1.9
RCCD1A6NED2 RNU6-296P-201ENST00000384608 107 ntBASIC3.2□□□□□ -1.9
RCCD1A6NED2 SNORD15B-201ENST00000384714 146 ntBASIC3.2□□□□□ -1.9
RCCD1A6NED2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RCCD1A6NED2 AC140658.3-201ENST00000567603 271 ntBASIC3.2□□□□□ -1.9
RCCD1A6NED2 AL161756.2-201ENST00000604597 246 ntBASIC3.2□□□□□ -1.9
RCCD1A6NED2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RCCD1A6NED2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.2□□□□□ -1.9
RCCD1A6NED2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RCCD1A6NED2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.19□□□□□ -1.9
RCCD1A6NED2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RCCD1A6NED2 MIR518A2-201ENST00000384966 87 ntBASIC3.19□□□□□ -1.9
RCCD1A6NED2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RCCD1A6NED2 MIR4764-201ENST00000580680 88 ntBASIC3.19□□□□□ -1.9
RCCD1A6NED2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RCCD1A6NED2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RCCD1A6NED2 AL035425.3-201ENST00000564206 4996 ntBASIC3.19□□□□□ -1.9
RCCD1A6NED2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RCCD1A6NED2 MAPK10-266ENST00000641066 6555 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RCCD1A6NED2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RCCD1A6NED2 MIR491-201ENST00000384877 84 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 MIR23A-201ENST00000385245 73 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 RNU6-519P-201ENST00000410590 108 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 Z96811.1-201ENST00000445880 108 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 RNU7-26P-201ENST00000458980 63 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 AC006023.1-201ENST00000603944 259 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 AC145423.2-201ENST00000610631 239 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 AC108206.1-201ENST00000570186 4159 ntBASIC3.18□□□□□ -1.9
RCCD1A6NED2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.18□□□□□ -1.9
RCCD1A6NED2 SNORA38-201ENST00000363946 132 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 SNORA2B-201ENST00000384583 137 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 AC005326.1-201ENST00000429197 123 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.17□□□□□ -1.9
RCCD1A6NED2 AC011753.1-201ENST00000451001 220 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.17□□□□□ -1.9
RCCD1A6NED2 AC020891.4-201ENST00000605745 93 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
RCCD1A6NED2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RCCD1A6NED2 RNU6-1237P-201ENST00000384777 107 ntBASIC3.16□□□□□ -1.9
RCCD1A6NED2 MIR520C-201ENST00000385005 87 ntBASIC3.16□□□□□ -1.9
RCCD1A6NED2 MIR483-201ENST00000385070 76 ntBASIC3.16□□□□□ -1.9
RCCD1A6NED2 RN7SKP123-201ENST00000410732 291 ntBASIC3.16□□□□□ -1.9
RCCD1A6NED2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.16□□□□□ -1.9
RCCD1A6NED2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
RCCD1A6NED2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
RCCD1A6NED2 BX510359.1-201ENST00000456973 237 ntBASIC3.16□□□□□ -1.9
RCCD1A6NED2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.16□□□□□ -1.9
RCCD1A6NED2 MIR6733-201ENST00000635723 61 ntBASIC3.16□□□□□ -1.9
RCCD1A6NED2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RCCD1A6NED2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.15□□□□□ -1.9
RCCD1A6NED2 RNU6-315P-201ENST00000362666 107 ntBASIC3.15□□□□□ -1.91
RCCD1A6NED2 SNORA38.1-201ENST00000364172 131 ntBASIC3.15□□□□□ -1.91
RCCD1A6NED2 RNY1P13-201ENST00000365030 105 ntBASIC3.15□□□□□ -1.91
RCCD1A6NED2 SNORA9-201ENST00000384215 133 ntBASIC3.15□□□□□ -1.91
RCCD1A6NED2 SNORD38B-201ENST00000384690 67 ntBASIC3.15□□□□□ -1.91
RCCD1A6NED2 RNA5SP501-201ENST00000410990 112 ntBASIC3.15□□□□□ -1.91
RCCD1A6NED2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.15□□□□□ -1.91
RCCD1A6NED2 SNORD38B-202ENST00000625943 69 ntBASIC3.15□□□□□ -1.91
RCCD1A6NED2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.15□□□□□ -1.91
RCCD1A6NED2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RCCD1A6NED2 RNU6-1229P-201ENST00000364295 107 ntBASIC3.14□□□□□ -1.91
RCCD1A6NED2 Y_RNA.565-201ENST00000384719 101 ntBASIC3.14□□□□□ -1.91
RCCD1A6NED2 MIR1236-201ENST00000408340 102 ntBASIC3.14□□□□□ -1.91
RCCD1A6NED2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.14□□□□□ -1.91
RCCD1A6NED2 RPS29P11-201ENST00000496507 171 ntBASIC3.14□□□□□ -1.91
RCCD1A6NED2 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
RCCD1A6NED2 AC133485.1-201ENST00000567176 124 ntBASIC3.14□□□□□ -1.91
RCCD1A6NED2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.14□□□□□ -1.91
RCCD1A6NED2 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
RCCD1A6NED2 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
RCCD1A6NED2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RCCD1A6NED2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
RCCD1A6NED2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RCCD1A6NED2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RCCD1A6NED2 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
RCCD1A6NED2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RCCD1A6NED2 HSBP1P2-201ENST00000299671 229 ntBASIC3.13□□□□□ -1.91
RCCD1A6NED2 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
RCCD1A6NED2 AC105272.1-201ENST00000438604 198 ntBASIC3.13□□□□□ -1.91
RCCD1A6NED2 MIR548AO-201ENST00000579992 96 ntBASIC3.13□□□□□ -1.91
RCCD1A6NED2 U7.4-201ENST00000614961 63 ntBASIC3.13□□□□□ -1.91
RCCD1A6NED2 MIR3651-201ENST00000630427 90 ntBASIC3.13□□□□□ -1.91
RCCD1A6NED2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.13□□□□□ -1.91
RCCD1A6NED2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.13□□□□□ -1.91
RCCD1A6NED2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.12□□□□□ -1.91
RCCD1A6NED2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RCCD1A6NED2 SNORA48.8-201ENST00000391324 134 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms