Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNU2-13P-201ENST00000515909 113 ntBASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNA5SP236-201ENST00000516169 116 ntBASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-958P-201ENST00000516995 106 ntBASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 AP001328.1-201ENST00000528550 176 ntBASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR3192-201ENST00000584920 77 ntBASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL096861.1-201ENST00000610899 123 ntBASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL596211.1-201ENST00000569873 2277 ntBASIC1.33□□□□□ -2.2
IGHV4-28A0A0C4DH34 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-508P-201ENST00000363231 103 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 Y_RNA.120-201ENST00000363304 110 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 Y_RNA.537-201ENST00000384626 109 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-257P-201ENST00000410238 98 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 HMGN2P38-201ENST00000423806 265 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU2-11P-201ENST00000459191 187 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU7-80P-201ENST00000459562 61 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNA5SP445-201ENST00000515889 115 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-998P-201ENST00000515894 101 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU5E-3P-201ENST00000515913 68 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 Y_RNA.690-201ENST00000516603 95 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL512310.8-201ENST00000550183 120 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC084768.2-201ENST00000622736 221 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC091932.4-201ENST00000623386 200 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC091895.1-201ENST00000624494 256 ntBASIC1.32□□□□□ -2.2
IGHV4-28A0A0C4DH34 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-704P-201ENST00000364162 103 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-309P-201ENST00000364573 106 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 SNORA16.1-201ENST00000364597 132 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU1-133P-201ENST00000364867 167 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 SNORD50.2-201ENST00000365465 70 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 SNORA70.7-201ENST00000384159 133 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 Y_RNA.454-201ENST00000384224 113 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR9-3-201ENST00000385084 90 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 MTND4LP9-201ENST00000427694 174 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL035398.1-201ENST00000430869 322 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 MTATP6P21-201ENST00000440681 189 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC245517.4-201ENST00000448601 281 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 RPL30P7-201ENST00000479312 323 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC015712.3-201ENST00000559380 164 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR3664-201ENST00000579074 99 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 uc_338.20-201ENST00000621563 178 ntBASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR302B-201ENST00000362188 73 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 SNORA24-201ENST00000384096 131 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 SNORA40-201ENST00000388090 126 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL392103.1-201ENST00000447000 198 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-165P-201ENST00000517170 99 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR4285-201ENST00000581001 85 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR4448-201ENST00000584360 86 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL022345.2-201ENST00000606307 135 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 AP001340.1-201ENST00000624405 217 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR4251-201ENST00000635819 61 ntBASIC1.3□□□□□ -2.2
IGHV4-28A0A0C4DH34 Y_RNA.294-201ENST00000364916 102 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 Y_RNA.586-201ENST00000391146 98 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL603914.1-201ENST00000401964 204 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU4-61P-201ENST00000411243 107 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 RPS29P11-201ENST00000496507 171 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 SNORA25.15-201ENST00000516487 89 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU7-53P-201ENST00000516705 60 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 AC011603.4-201ENST00000611325 277 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL121890.5-201ENST00000620848 304 ntBASIC1.29□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNA5SP48-201ENST00000363969 126 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-913P-201ENST00000390913 95 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 TMSB4XP3-201ENST00000445144 114 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 Y_RNA.651-201ENST00000459380 103 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU7-45P-201ENST00000459460 63 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 SNORA31.4-201ENST00000516049 129 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 Y_RNA.692-201ENST00000516627 105 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 RN7SKP88-201ENST00000516847 250 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 RNU6-902P-201ENST00000517212 91 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR4769-201ENST00000584126 77 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 HSPE1P19-201ENST00000603327 295 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 U7.2-201ENST00000607576 63 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 MIR8081-201ENST00000611533 95 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 7SK.8-201ENST00000612110 250 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 7SK.11-201ENST00000615477 250 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL353997.5-201ENST00000618886 171 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 7SK.13-201ENST00000622040 250 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
IGHV4-28A0A0C4DH34 SNORA25.3-201ENST00000363205 127 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNA5SP99-201ENST00000364020 114 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU4-16P-201ENST00000364737 141 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-1190P-201ENST00000410811 104 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 AC009474.2-201ENST00000451383 136 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU7-73P-201ENST00000458743 63 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 snoU13.25-201ENST00000458945 104 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 snoU13.16-201ENST00000459350 104 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms