Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SNORA1.1-201ENST00000364671 133 ntBASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 Y_RNA.388-201ENST00000383919 113 ntBASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR512-1-201ENST00000384913 84 ntBASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-913P-201ENST00000390913 95 ntBASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU7-43P-201ENST00000516554 64 ntBASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR4529-201ENST00000578110 78 ntBASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 AC096720.1-201ENST00000604441 183 ntBASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 MIR8057-201ENST00000620957 69 ntBASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGA11Q9Y5H2 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 SNORD46.1-201ENST00000364139 104 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-1134P-201ENST00000365156 101 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 Y_RNA.377-201ENST00000365644 108 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 AC004941.2-201ENST00000427009 228 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-521P-201ENST00000516663 105 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-826P-201ENST00000516827 104 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 AC007179.3-201ENST00000604976 235 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 AL512310.12-203ENST00000640543 90 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
PCDHGA11Q9Y5H2 RNU6-1123P-201ENST00000362347 106 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-170P-201ENST00000362832 104 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-457P-201ENST00000363999 107 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-679P-201ENST00000391003 106 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 AL023284.1-201ENST00000403956 276 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-1190P-201ENST00000410811 104 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 MIR5195-201ENST00000583555 115 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 RPL12P50-201ENST00000603116 116 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 AL590808.1-201ENST00000618696 141 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 MIR3651-201ENST00000630427 90 ntBASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
PCDHGA11Q9Y5H2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
PCDHGA11Q9Y5H2 RNA5SP100-201ENST00000410903 110 ntBASIC2.76□□□□□ -1.97
PCDHGA11Q9Y5H2 RNA5SP59-201ENST00000410922 110 ntBASIC2.76□□□□□ -1.97
PCDHGA11Q9Y5H2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.76□□□□□ -1.97
PCDHGA11Q9Y5H2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.76□□□□□ -1.97
PCDHGA11Q9Y5H2 SNORD14A-201ENST00000606526 91 ntBASIC2.76□□□□□ -1.97
PCDHGA11Q9Y5H2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.76□□□□□ -1.97
PCDHGA11Q9Y5H2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.76□□□□□ -1.97
PCDHGA11Q9Y5H2 SNORA32-201ENST00000384072 121 ntBASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 MRPL35P3-201ENST00000421557 364 ntBASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU7-61P-201ENST00000515897 61 ntBASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-795P-201ENST00000516323 103 ntBASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 AC062037.1-201ENST00000605302 128 ntBASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 MIR8055-201ENST00000610739 97 ntBASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 AC012531.4-201ENST00000616509 177 ntBASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PCDHGA11Q9Y5H2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-644P-201ENST00000391155 98 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 RNA5SP450-201ENST00000411206 102 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 RNA5SP57-201ENST00000459463 123 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 Y_RNA.659-201ENST00000515994 113 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 RNA5SP341-201ENST00000516261 117 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 RN7SKP12-201ENST00000516275 143 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 SCARNA13-201ENST00000516672 275 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 RN7SKP57-201ENST00000517248 293 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 AL162274.2-201ENST00000614406 332 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHGA11Q9Y5H2 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 AC005336.3-201ENST00000623833 2679 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 MIR26A1-201ENST00000362205 77 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-60P-201ENST00000364792 103 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-1201P-201ENST00000384227 107 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 AC245047.7-201ENST00000440265 293 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-322P-201ENST00000516010 103 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 MIR4325-201ENST00000583049 90 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 MIR3605-201ENST00000583214 100 ntBASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDHGA11Q9Y5H2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 Y_RNA.290-201ENST00000364879 114 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 SNORD115-35-201ENST00000365122 82 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 MIR520C-201ENST00000385005 87 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 AL353813.1-201ENST00000440700 253 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 SNORA31.17-201ENST00000516953 127 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 SNORA31.25-201ENST00000517242 134 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 MIR4764-201ENST00000580680 88 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 AC008133.2-201ENST00000624540 351 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 FO624990.1-201ENST00000636373 85 ntBASIC2.72□□□□□ -1.97
PCDHGA11Q9Y5H2 RNU6-1313P-201ENST00000362622 102 ntBASIC2.71□□□□□ -1.98
PCDHGA11Q9Y5H2 Y_RNA.95-201ENST00000363079 95 ntBASIC2.71□□□□□ -1.98
PCDHGA11Q9Y5H2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.71□□□□□ -1.98
PCDHGA11Q9Y5H2 HMGN1P33-201ENST00000432945 451 ntBASIC2.71□□□□□ -1.98
PCDHGA11Q9Y5H2 MIR1270-201ENST00000459320 83 ntBASIC2.71□□□□□ -1.98
PCDHGA11Q9Y5H2 Y_RNA.705-201ENST00000516862 110 ntBASIC2.71□□□□□ -1.98
PCDHGA11Q9Y5H2 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
PCDHGA11Q9Y5H2 MIR4439-201ENST00000583746 80 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms