Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 RNU6-424P-201ENST00000384367 105 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 MIR583-201ENST00000384846 75 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 SNORA26.9-201ENST00000391322 122 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 HMGN2P23-201ENST00000456759 269 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 SNORA31.4-201ENST00000516049 129 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 RNA5SP168-201ENST00000516642 112 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 AC025166.1-201ENST00000612411 163 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.35-201ENST00000362601 101 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 RNU6-112P-201ENST00000363599 104 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 RNU6-1189P-201ENST00000383958 107 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 RNU6-163P-201ENST00000384396 106 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 MIR1263-201ENST00000408324 86 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 MTATP6P21-201ENST00000440681 189 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 AC099513.1-201ENST00000490423 301 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 CYCTP-201ENST00000504253 315 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 PDCD5P2-201ENST00000507570 312 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 RNU6-240P-201ENST00000516098 97 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 MTND5P18-201ENST00000445624 1801 ntBASIC1.93□□□□□ -2.1
LRIT1Q9P2V4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.242-201ENST00000364473 110 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 SNORA2.2-201ENST00000365473 135 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 MIR548A1-201ENST00000385041 97 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 SNORA40.18-201ENST00000391200 128 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 AC063976.4-201ENST00000421971 163 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 AC093850.1-201ENST00000454121 251 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 AP003484.1-201ENST00000530974 250 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 AL670379.3-201ENST00000605040 251 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 MIR6845-201ENST00000613182 61 ntBASIC1.92□□□□□ -2.1
LRIT1Q9P2V4 RNU6-349P-201ENST00000362402 107 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 RN7SKP200-201ENST00000410564 320 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 AC015922.2-201ENST00000435593 184 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 HMGN2P32-201ENST00000444648 269 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 HSPE1P19-201ENST00000603327 295 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 SNORA28-201ENST00000606769 126 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 AC021506.2-201ENST00000612354 169 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 AC027279.3-201ENST00000625055 122 ntBASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 MIR548A3-201ENST00000385297 97 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 RPS26P48-201ENST00000491713 339 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 AC022254.1-201ENST00000567857 235 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 AL137067.1-201ENST00000615933 120 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
LRIT1Q9P2V4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 SNORA22-201ENST00000383907 134 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 RNU4-52P-201ENST00000384209 138 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 SNORD116-21-201ENST00000384507 92 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 Y_RNA.528-201ENST00000384575 108 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 MIR520A-201ENST00000384862 85 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 MIR516B2-201ENST00000385190 85 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 MT-TI-201ENST00000387365 69 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 AL034345.1-201ENST00000407768 123 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 AC069257.2-201ENST00000441819 155 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 Y_RNA.649-201ENST00000459077 103 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 AC079804.2-201ENST00000490376 200 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 RNU7-181P-201ENST00000517234 74 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 SNRPGP19-201ENST00000603826 189 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 AP000553.5-201ENST00000641933 54 ntBASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LRIT1Q9P2V4 RNU6-833P-201ENST00000363486 107 ntBASIC1.88□□□□□ -2.11
LRIT1Q9P2V4 RNU6-755P-201ENST00000364400 103 ntBASIC1.88□□□□□ -2.11
LRIT1Q9P2V4 RNU7-12P-201ENST00000516030 62 ntBASIC1.88□□□□□ -2.11
LRIT1Q9P2V4 RNU6-113P-201ENST00000516653 101 ntBASIC1.88□□□□□ -2.11
LRIT1Q9P2V4 AL121890.5-201ENST00000620848 304 ntBASIC1.88□□□□□ -2.11
LRIT1Q9P2V4 AC091932.4-201ENST00000623386 200 ntBASIC1.88□□□□□ -2.11
LRIT1Q9P2V4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
LRIT1Q9P2V4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.87□□□□□ -2.11
LRIT1Q9P2V4 SNORD38C-201ENST00000384381 69 ntBASIC1.87□□□□□ -2.11
LRIT1Q9P2V4 MIR526A1-201ENST00000384897 85 ntBASIC1.87□□□□□ -2.11
LRIT1Q9P2V4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 286.1 ms