Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-1211P-201ENST00000459179 105 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU7-28P-201ENST00000516759 62 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-971P-201ENST00000516920 106 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 MIR3198-2-201ENST00000577868 80 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORA28-201ENST00000606769 126 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 AC011603.4-201ENST00000611325 277 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 AC021506.2-201ENST00000612354 169 ntBASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
NCKIPSDQ9NZQ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 MIR424-201ENST00000362227 98 ntBASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 RNY1P11-201ENST00000363759 113 ntBASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.218-201ENST00000364218 104 ntBASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-504P-201ENST00000516568 104 ntBASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 AC131055.1-201ENST00000584626 316 ntBASIC1.69□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-1290P-201ENST00000362957 109 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.120-201ENST00000363304 110 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-457P-201ENST00000363999 107 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-915P-201ENST00000364943 103 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-1336P-201ENST00000383886 109 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-424P-201ENST00000384367 105 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU4-57P-201ENST00000515980 135 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 RN7SKP179-201ENST00000516126 217 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 AC007751.1-201ENST00000529260 376 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 AL365205.2-201ENST00000594586 68 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 AL512598.1-201ENST00000610158 273 ntBASIC1.68□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORD18B-201ENST00000365659 72 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORD24-201ENST00000383884 75 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-203P-201ENST00000384038 104 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 MIR548A2-201ENST00000384956 97 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 MIR624-201ENST00000385217 97 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORA17.3-201ENST00000391159 129 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-735P-201ENST00000410612 107 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 HSPE1P24-201ENST00000450782 238 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 AC114811.1-201ENST00000507207 168 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-1333P-201ENST00000516162 93 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORD45.4-201ENST00000516629 73 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 RNA5SP168-201ENST00000516642 112 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 AL359881.1-201ENST00000602916 267 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 MIR8063-201ENST00000621930 81 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 AC095038.3-201ENST00000634439 195 ntBASIC1.67□□□□□ -2.14
NCKIPSDQ9NZQ3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 AL442644.1-201ENST00000454390 3105 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 ICE2P2-201ENST00000483823 2787 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 RNY1P10-201ENST00000363268 113 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.273-201ENST00000364703 102 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 RNA5SP127-201ENST00000411051 133 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORA18.4-201ENST00000516440 124 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 Y_RNA.692-201ENST00000516627 105 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 SNORD53B-201ENST00000577887 78 ntBASIC1.66□□□□□ -2.14
NCKIPSDQ9NZQ3 RNU6-834P-201ENST00000362367 110 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-888P-201ENST00000363010 101 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-268P-201ENST00000364174 107 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 SNORD61-201ENST00000384252 73 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 RNA5SP247-201ENST00000411181 105 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 BTF3P4-201ENST00000418852 495 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 CYCTP-201ENST00000504253 315 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-1234P-201ENST00000516877 103 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 AC090049.2-201ENST00000550377 109 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 SNORA77B-201ENST00000578179 125 ntBASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.261-201ENST00000364631 102 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.563-201ENST00000384707 108 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR518F-201ENST00000384973 87 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 AL603914.1-201ENST00000401964 204 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 AC004965.1-201ENST00000413033 213 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 AP1B1P2-201ENST00000416196 106 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 MTATP6P21-201ENST00000440681 189 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 PGBD4P5-201ENST00000445958 426 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-659P-201ENST00000516454 104 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 AC006441.5-201ENST00000612680 209 ntBASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.64□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 SNORD14E-201ENST00000364009 85 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-442P-201ENST00000383968 104 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 SNORA1-201ENST00000384107 130 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 RNU6-163P-201ENST00000384396 106 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR194-1-201ENST00000384892 85 ntBASIC1.63□□□□□ -2.15
NCKIPSDQ9NZQ3 MIR513A1-201ENST00000385138 129 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms