Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SMPD4Q9NXE4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
SMPD4Q9NXE4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 SNORD115-19-201ENST00000363098 82 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 SNORD115-18-201ENST00000363293 82 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 RNA5SP393-201ENST00000363423 117 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.190-201ENST00000363964 101 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 SNORD115-17-201ENST00000364612 82 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 RNU6-979P-201ENST00000383896 107 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 AL451046.2-201ENST00000403074 277 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 RNU6-402P-201ENST00000410678 103 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 RNA5SP144-201ENST00000410846 116 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 snoU13.26-201ENST00000459452 105 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 SCARNA3-201ENST00000517097 143 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 MIR5194-201ENST00000582634 120 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 MIR6766-201ENST00000622641 72 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 FO624990.1-201ENST00000636373 85 ntBASIC2.33□□□□□ -2.04
SMPD4Q9NXE4 MIR342-201ENST00000362212 99 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 RNU6-363P-201ENST00000362895 105 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.494-201ENST00000384432 111 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 SNX2P2-201ENST00000424553 323 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 SUMO1P4-201ENST00000429430 302 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 AL161788.1-201ENST00000441805 169 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 RNU7-26P-201ENST00000458980 63 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 RPS23P4-201ENST00000487908 423 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 AC023141.11-201ENST00000508864 202 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 SNORD45.4-201ENST00000516629 73 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 RNU1-142P-201ENST00000516682 145 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 AC004812.1-201ENST00000540773 146 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 MIR5588-201ENST00000581890 63 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 AL049779.4-201ENST00000604500 156 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 AL353149.1-201ENST00000610667 244 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 MIR203B-201ENST00000636080 86 ntBASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.32□□□□□ -2.04
SMPD4Q9NXE4 ICE2P2-201ENST00000483823 2787 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 RNU6-661P-201ENST00000362409 107 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.155-201ENST00000363632 101 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 RNU6-219P-201ENST00000364728 107 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.313-201ENST00000365095 103 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.507-201ENST00000384500 99 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 SNORA8-201ENST00000384574 139 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 RNU6-679P-201ENST00000391003 106 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 RNU6-279P-201ENST00000391297 101 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 RN7SKP200-201ENST00000410564 320 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 RNU6-733P-201ENST00000410759 104 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 AL606517.2-201ENST00000442855 241 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 RNU7-80P-201ENST00000459562 61 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 AL163195.1-201ENST00000496941 348 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 AL449363.1-201ENST00000617815 186 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.31□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.10-201ENST00000362371 110 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 RNU4-67P-201ENST00000364569 141 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 RNU6-60P-201ENST00000364792 103 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 SNORD115-35-201ENST00000365122 82 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 SNORA80E-201ENST00000384744 137 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 RNU11-5P-201ENST00000391216 129 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 SNORA11.4-201ENST00000408823 129 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 MIR1270-201ENST00000459320 83 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 snoU13.15-201ENST00000459407 104 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 AC018868.1-201ENST00000491307 315 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 MIR5739-201ENST00000619803 80 ntBASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMPD4Q9NXE4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 RNU6-409P-201ENST00000384114 104 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 RNU6-242P-201ENST00000384359 107 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 AC087499.4-201ENST00000448505 178 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 RNU6-857P-201ENST00000515893 110 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 SNORA48.11-201ENST00000517015 89 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 MIR7157-201ENST00000635801 60 ntBASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
SMPD4Q9NXE4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 SNORD115-13-201ENST00000363358 82 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 SNORD115-16-201ENST00000363887 82 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 SNORD115-1-201ENST00000364961 82 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 RNU1-138P-201ENST00000384093 164 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.454-201ENST00000384224 113 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 Y_RNA.467-201ENST00000384297 102 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 RNA5SP323-201ENST00000391094 133 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 POLR2J4-204ENST00000418424 324 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 RNU6-667P-201ENST00000517186 102 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.28□□□□□ -2.04
SMPD4Q9NXE4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms