Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS11Q9H270 MIR3163-201ENST00000581592 73 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 AC012531.4-201ENST00000616509 177 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 AC087741.2-201ENST00000619415 172 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.31□□□□□ -2.04
VPS11Q9H270 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS11Q9H270 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
VPS11Q9H270 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
VPS11Q9H270 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS11Q9H270 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 SNORD115-28-201ENST00000363931 81 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 Y_RNA.221-201ENST00000364248 96 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 MIR759-201ENST00000390224 91 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 CST2P1-201ENST00000425770 87 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 AL353813.1-201ENST00000440700 253 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 AC108938.1-201ENST00000451204 136 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 UBE2DNL-203ENST00000474922 222 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 RNU6-795P-201ENST00000516323 103 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 AC022254.1-201ENST00000567857 235 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 MIR3618-201ENST00000580330 88 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 MIR1255B1-201ENST00000636325 63 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 MIR338-201ENST00000636369 67 ntBASIC2.3□□□□□ -2.04
VPS11Q9H270 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS11Q9H270 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS11Q9H270 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS11Q9H270 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS11Q9H270 RNA5SP276-201ENST00000362580 94 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 RNU4-16P-201ENST00000364737 141 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 RNA5SP37-201ENST00000365420 130 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 Y_RNA.500-201ENST00000384466 111 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 MIR577-201ENST00000385196 96 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 RNU6-644P-201ENST00000391155 98 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 MIR1912-201ENST00000410389 80 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 RNU2-13P-201ENST00000515909 113 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 RNU6-162P-201ENST00000516228 103 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 RNVU1-2-201ENST00000516326 135 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 RNU7-6P-201ENST00000516845 62 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 AL358944.1-201ENST00000528537 144 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 SNORD53-201ENST00000579969 78 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 AC103810.6-201ENST00000606708 136 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 Y_RNA.773-201ENST00000607168 90 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 AC046143.2-201ENST00000609789 160 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 U7.3-201ENST00000616123 62 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 AC091932.4-201ENST00000623386 200 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 AC095038.3-201ENST00000634439 195 ntBASIC2.29□□□□□ -2.04
VPS11Q9H270 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VPS11Q9H270 RNU6-862P-201ENST00000362804 105 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 RNU4-36P-201ENST00000364294 144 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 RNU1-133P-201ENST00000364867 167 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 RNU6-497P-201ENST00000365316 104 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR515-2-201ENST00000384883 83 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR515-1-201ENST00000384884 83 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR17-201ENST00000385012 84 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 Y_RNA.601-201ENST00000410500 113 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 AL445646.1-201ENST00000431784 216 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 AC099677.2-201ENST00000436385 175 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 AC234781.5-201ENST00000508429 271 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR4287-201ENST00000579398 78 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR3683-201ENST00000580847 82 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR5007-201ENST00000583098 95 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR4762-201ENST00000585261 75 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 MIR3202-2-201ENST00000635980 79 ntBASIC2.28□□□□□ -2.04
VPS11Q9H270 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
VPS11Q9H270 RNU6-170P-201ENST00000362832 104 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 RNU6-1125P-201ENST00000363601 107 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 Y_RNA.244-201ENST00000364484 109 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 RNU6-675P-201ENST00000384236 104 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 Y_RNA.531-201ENST00000384589 121 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 AC004941.2-201ENST00000427009 228 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 RPL39P39-201ENST00000455840 151 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 AC090255.1-201ENST00000495779 349 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 AC069114.2-201ENST00000604699 304 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 AL359075.3-201ENST00000613288 217 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 AC091304.10-201ENST00000641554 121 ntBASIC2.27□□□□□ -2.05
VPS11Q9H270 RNY1P1-201ENST00000364372 112 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 U8.5-201ENST00000364528 136 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 SNORA4.2-201ENST00000365313 147 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 RNU6-1276P-201ENST00000365372 104 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 RNU6-442P-201ENST00000383968 104 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 SNORA8-201ENST00000384574 139 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 RNA5SP212-201ENST00000391223 107 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 AC096949.1-201ENST00000412047 152 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 BTF3P4-201ENST00000418852 495 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS11Q9H270 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 RNA5SP24-201ENST00000516478 95 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 RNU6-521P-201ENST00000516663 105 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 MIR514B-201ENST00000516774 80 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 AP003484.1-201ENST00000530974 250 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 SUB1P4-201ENST00000566062 339 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 MIR5094-201ENST00000578766 85 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 AL513534.2-201ENST00000603836 250 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.26□□□□□ -2.05
VPS11Q9H270 AL773524.1-201ENST00000614065 229 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.26□□□□□ -2.05
VPS11Q9H270 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
VPS11Q9H270 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS11Q9H270 SNORD115-19-201ENST00000363098 82 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms