Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SNRPGP14-201ENST00000435400 219 ntBASIC2.72□□□□□ -1.97
CNTNAP4Q9C0A0 AC011753.1-201ENST00000451001 220 ntBASIC2.72□□□□□ -1.97
CNTNAP4Q9C0A0 RNU7-80P-201ENST00000459562 61 ntBASIC2.72□□□□□ -1.97
CNTNAP4Q9C0A0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.72□□□□□ -1.97
CNTNAP4Q9C0A0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CNTNAP4Q9C0A0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CNTNAP4Q9C0A0 RNA5SP493-201ENST00000364115 91 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-1276P-201ENST00000365372 104 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 Y_RNA.454-201ENST00000384224 113 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 RNU2-13P-201ENST00000515909 113 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 SNORD45.4-201ENST00000516629 73 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 AC022523.2-201ENST00000561045 150 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 AC022254.1-201ENST00000567857 235 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CNTNAP4Q9C0A0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-349P-201ENST00000362402 107 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-862P-201ENST00000362804 105 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 SNORA63D-201ENST00000364359 132 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-1296P-201ENST00000383879 107 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 Y_RNA.547-201ENST00000384654 119 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 SNORA80E-201ENST00000384744 137 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 MIR499A-201ENST00000384903 122 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 MIR548D2-201ENST00000384955 97 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 MIR518E-201ENST00000385252 88 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 AL627390.1-201ENST00000396055 340 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 MIR1262-201ENST00000408276 93 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 SNORA28-201ENST00000606769 126 ntBASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CNTNAP4Q9C0A0 RNY3P2-201ENST00000362918 102 ntBASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-690P-201ENST00000365242 106 ntBASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 MIR29C-201ENST00000385231 88 ntBASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 AC139453.2-201ENST00000487255 133 ntBASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 AC005786.1-201ENST00000588553 154 ntBASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 AL162726.3-218ENST00000636401 95 ntBASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CNTNAP4Q9C0A0 RNY1P1-201ENST00000364372 112 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU1-133P-201ENST00000364867 167 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 Y_RNA.298-201ENST00000364960 107 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 Y_RNA.313-201ENST00000365095 103 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 Y_RNA.440-201ENST00000384120 114 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNY1P6-201ENST00000384193 109 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 AC245047.3-201ENST00000429428 127 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU7-61P-201ENST00000515897 61 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 SCARNA23-201ENST00000516060 130 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU7-25P-201ENST00000516544 62 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 SUMO2P16-201ENST00000519475 264 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 MIR3169-201ENST00000578032 83 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU1-17P-201ENST00000363022 152 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 SNORA33-201ENST00000363664 130 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-979P-201ENST00000383896 107 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-675P-201ENST00000384236 104 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 SNORD38C-201ENST00000384381 69 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 AC069257.2-201ENST00000441819 155 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-857P-201ENST00000515893 110 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU7-123P-201ENST00000515911 60 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-162P-201ENST00000516228 103 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 MIR3683-201ENST00000580847 82 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 MIR548Z-201ENST00000584743 97 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 AC012531.4-201ENST00000616509 177 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 AC027279.3-201ENST00000625055 122 ntBASIC2.68□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-23P-201ENST00000363283 107 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-1099P-201ENST00000363533 107 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 SNORA4.2-201ENST00000365313 147 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 RNU1-51P-201ENST00000365345 176 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-644P-201ENST00000391155 98 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 snoU13.18-201ENST00000459483 104 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-267P-201ENST00000516714 103 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 AP003484.1-201ENST00000530974 250 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 DEFB131E-201ENST00000532329 154 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 U7.3-201ENST00000616123 62 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 MIR8070-201ENST00000616510 88 ntBASIC2.67□□□□□ -1.98
CNTNAP4Q9C0A0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 Y_RNA.351-201ENST00000365436 96 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-950P-201ENST00000384651 107 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 RPL39P25-201ENST00000449384 154 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6-795P-201ENST00000516323 103 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 AC021443.1-201ENST00000604478 211 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 MIR3670-4-201ENST00000612260 65 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 IGLL4P-201ENST00000614590 133 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.66□□□□□ -1.98
CNTNAP4Q9C0A0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms