Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MTND5P18-201ENST00000445624 1801 ntBASIC2□□□□□ -2.09
NDC1Q9BTX1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NDC1Q9BTX1 AC131280.1-202ENST00000624067 4211 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 AC008555.8-201ENST00000623602 2168 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 Y_RNA.346-201ENST00000365385 112 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 AL023284.1-201ENST00000403956 276 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 RPS26P48-201ENST00000491713 339 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 RNU6-240P-201ENST00000516098 97 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 RNU6-830P-201ENST00000516353 107 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 RNU6-589P-201ENST00000516485 107 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 RNU7-70P-201ENST00000516941 66 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 Y_RNA.709-201ENST00000516952 92 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.99□□□□□ -2.09
NDC1Q9BTX1 AL137067.1-201ENST00000615933 120 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 AL121890.5-201ENST00000620848 304 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 AL513423.1-201ENST00000621695 132 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 AC092881.1-201ENST00000638218 2733 ntBASIC1.99□□□□□ -2.09
NDC1Q9BTX1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
NDC1Q9BTX1 SNORA63.4-201ENST00000362763 126 ntBASIC1.98□□□□□ -2.09
NDC1Q9BTX1 Y_RNA.351-201ENST00000365436 96 ntBASIC1.98□□□□□ -2.09
NDC1Q9BTX1 AC093850.1-201ENST00000454121 251 ntBASIC1.98□□□□□ -2.09
NDC1Q9BTX1 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
NDC1Q9BTX1 MIR203B-201ENST00000636080 86 ntBASIC1.98□□□□□ -2.09
NDC1Q9BTX1 RNU6-349P-201ENST00000362402 107 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 RNA5SP99-201ENST00000364020 114 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 SNORA16B-201ENST00000364674 135 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 RNU1-133P-201ENST00000364867 167 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 Y_RNA.528-201ENST00000384575 108 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 MIR548A1-201ENST00000385041 97 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 MIR516B2-201ENST00000385190 85 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 RNU6-482P-201ENST00000391068 107 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 Y_RNA.649-201ENST00000459077 103 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 AC099513.1-201ENST00000490423 301 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 RNU7-181P-201ENST00000517234 74 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 IGLV3-17-201ENST00000519099 244 ntBASIC1.97□□□□□ -2.09
NDC1Q9BTX1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
NDC1Q9BTX1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NDC1Q9BTX1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
NDC1Q9BTX1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
NDC1Q9BTX1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NDC1Q9BTX1 MIR342-201ENST00000362212 99 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 RNU6-153P-201ENST00000364422 104 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 Y_RNA.241-201ENST00000364470 117 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 RNU6-690P-201ENST00000365242 106 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 SNORD116-21-201ENST00000384507 92 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 AL627390.1-201ENST00000396055 340 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 PGBD4P5-201ENST00000445958 426 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 RNU7-80P-201ENST00000459562 61 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 PDCD5P2-201ENST00000507570 312 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 MIR4287-201ENST00000579398 78 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 MIR6895-201ENST00000613497 78 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 AC091932.4-201ENST00000623386 200 ntBASIC1.96□□□□□ -2.1
NDC1Q9BTX1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NDC1Q9BTX1 AL442644.1-201ENST00000454390 3105 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.95□□□□□ -2.1
NDC1Q9BTX1 AL596211.1-201ENST00000569873 2277 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 MIR424-201ENST00000362227 98 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 Y_RNA.35-201ENST00000362601 101 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 SNORA22-201ENST00000383907 134 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 RNY1P6-201ENST00000384193 109 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 SNORA27-201ENST00000384323 126 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 MIR452-201ENST00000385020 85 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 MIR660-201ENST00000385235 97 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 U8.17-201ENST00000391292 132 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 RNA5SP136-201ENST00000410906 107 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.95□□□□□ -2.1
NDC1Q9BTX1 RNU6-548P-201ENST00000517083 115 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 AC121758.2-201ENST00000553271 193 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.95□□□□□ -2.1
NDC1Q9BTX1 SNORD3E-202ENST00000627253 216 ntBASIC1.95□□□□□ -2.1
NDC1Q9BTX1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
NDC1Q9BTX1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 AC019129.1-201ENST00000403786 261 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 AC244636.1-201ENST00000421152 228 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.94□□□□□ -2.1
NDC1Q9BTX1 AC063976.4-201ENST00000421971 163 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 SNX2P2-201ENST00000424553 323 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 MIR4778-201ENST00000577635 80 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 AL353997.5-201ENST00000618886 171 ntBASIC1.94□□□□□ -2.1
NDC1Q9BTX1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.94□□□□□ -2.1
NDC1Q9BTX1 SNORD115-34-201ENST00000362441 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-12-201ENST00000362583 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-29-201ENST00000362834 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-9-201ENST00000362912 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-21-201ENST00000362963 81 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-14-201ENST00000363090 81 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-13-201ENST00000363358 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-41-201ENST00000363608 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-11-201ENST00000363616 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-5-201ENST00000363633 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-39-201ENST00000363694 82 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms