Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-862P-201ENST00000362804 105 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 Y_RNA.73-201ENST00000362910 113 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 RNY3P2-201ENST00000362918 102 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 SNORD14E-201ENST00000364009 85 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-442P-201ENST00000383968 104 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU6-1152P-201ENST00000384576 107 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 RNU7-70P-201ENST00000516941 66 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 AL355297.2-201ENST00000604792 129 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 U4atac.1-201ENST00000618345 95 ntBASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDK5RAP1Q96SZ6 AC131280.1-202ENST00000624067 4211 ntBASIC2.28□□□□□ -2.05
CDK5RAP1Q96SZ6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 MIR302B-201ENST00000362188 73 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 MIRLET7G-201ENST00000362280 84 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 Y_RNA.531-201ENST00000384589 121 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 MIR759-201ENST00000390224 91 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 RNA5SP109-201ENST00000391010 116 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 AL512326.2-201ENST00000426359 151 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 AC099677.2-201ENST00000436385 175 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU7-45P-201ENST00000459460 63 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU7-61P-201ENST00000515897 61 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 SNORA48.11-201ENST00000517015 89 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 AP002004.2-201ENST00000531656 154 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 AC012531.4-201ENST00000616509 177 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 AC087741.2-201ENST00000619415 172 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 MIR219B-201ENST00000637023 88 ntBASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
CDK5RAP1Q96SZ6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 Y_RNA.17-201ENST00000362433 111 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU6-228P-201ENST00000362700 106 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 Y_RNA.78-201ENST00000362970 110 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 SNORD78.1-201ENST00000390866 65 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU6-644P-201ENST00000391155 98 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 ATP5J2P3-201ENST00000451550 258 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU1-131P-201ENST00000458943 161 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 AC022254.1-201ENST00000567857 235 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 MIR3163-201ENST00000581592 73 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 AC087685.1-201ENST00000587507 141 ntBASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDK5RAP1Q96SZ6 AC080100.1-201ENST00000624239 5356 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 snoU2-30.1-201ENST00000365012 70 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 Y_RNA.466-201ENST00000384294 113 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 MIR605-201ENST00000385078 83 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 AL353813.1-201ENST00000440700 253 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU6-158P-201ENST00000517104 100 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 DEFB131E-201ENST00000532329 154 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 MIR3618-201ENST00000580330 88 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 MIR4762-201ENST00000585261 75 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 AC078899.2-201ENST00000595282 212 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 AC091304.10-201ENST00000641554 121 ntBASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CDK5RAP1Q96SZ6 Y_RNA.93-201ENST00000363066 109 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU6-1099P-201ENST00000363533 107 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 RN7SKP200-201ENST00000410564 320 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 AC114811.1-201ENST00000507207 168 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 SCARNA23-201ENST00000516060 130 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 Y_RNA.714-201ENST00000517065 90 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 AL358944.1-201ENST00000528537 144 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 FAM71BP1-201ENST00000604431 523 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 AL353149.1-201ENST00000610667 244 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 AC022513.1-201ENST00000624512 117 ntBASIC2.24□□□□□ -2.05
CDK5RAP1Q96SZ6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 U8.5-201ENST00000364528 136 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 SNORA25B-201ENST00000365507 128 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU6-1124P-201ENST00000384169 107 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU6-820P-201ENST00000384273 107 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 MIR577-201ENST00000385196 96 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 CYP2C59P-201ENST00000457790 269 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU7-193P-201ENST00000516723 65 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU6-1258P-201ENST00000516911 111 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 U7.3-201ENST00000616123 62 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 AP006437.1-201ENST00000641440 3685 ntBASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDK5RAP1Q96SZ6 SNORD115-3-201ENST00000363100 82 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU6-497P-201ENST00000365316 104 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU2-63P-201ENST00000410792 194 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 RNA5SP144-201ENST00000410846 116 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 RNA5SP270-201ENST00000411361 118 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 AC245047.3-201ENST00000429428 127 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 AC022137.1-201ENST00000483735 151 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 RPS27P21-201ENST00000486977 252 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU2-13P-201ENST00000515909 113 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 RNU7-181P-201ENST00000517234 74 ntBASIC2.22□□□□□ -2.05
CDK5RAP1Q96SZ6 AC004812.1-201ENST00000540773 146 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms