Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 RNU6-384P-201ENST00000364900 104 ntBASIC-3.16□□□□□ -2.92
VPS13AQ96RL7 RNU6-800P-201ENST00000384473 103 ntBASIC-3.16□□□□□ -2.92
VPS13AQ96RL7 RNU6-528P-201ENST00000516926 100 ntBASIC-3.16□□□□□ -2.92
VPS13AQ96RL7 RNU6-998P-201ENST00000515894 101 ntBASIC-3.16□□□□□ -2.92
VPS13AQ96RL7 RNU6-98P-201ENST00000384173 107 ntBASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 RNU6-376P-201ENST00000384731 106 ntBASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 AC087883.1-201ENST00000551882 391 ntBASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 AC005520.5-201ENST00000613926 164 ntBASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 RNU6-878P-201ENST00000384578 110 ntBASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 RNU7-181P-201ENST00000517234 74 ntBASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 MIR4762-201ENST00000585261 75 ntBASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 AC022418.1-201ENST00000624118 445 ntBASIC-3.17□□□□□ -2.92
VPS13AQ96RL7 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 Y_RNA.601-201ENST00000410500 113 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 RNU6-602P-201ENST00000411155 105 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 RNU6-665P-201ENST00000384639 107 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 AP001542.1-201ENST00000591314 200 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 RNU6-839P-201ENST00000363347 108 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 RNU6-1251P-201ENST00000364502 107 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 Y_RNA.296-201ENST00000364930 108 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 RNU6-143P-201ENST00000516942 93 ntBASIC-3.18□□□□□ -2.92
VPS13AQ96RL7 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 MIR586-201ENST00000385035 97 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 SNORD73A-201ENST00000386062 65 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 AC010486.2-201ENST00000505572 483 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 RNU2-13P-201ENST00000515909 113 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 MIR8055-201ENST00000610739 97 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 AC091931.1-201ENST00000623488 728 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 EPS15P1-201ENST00000448836 336 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 AC021451.1-201ENST00000523498 1129 ntBASIC-3.19□□□□□ -2.92
VPS13AQ96RL7 FGF7P2-201ENST00000332473 296 ntBASIC-3.2□□□□□ -2.92
VPS13AQ96RL7 Y_RNA.576-201ENST00000384781 102 ntBASIC-3.2□□□□□ -2.92
VPS13AQ96RL7 AC022878.1-201ENST00000530684 149 ntBASIC-3.2□□□□□ -2.92
VPS13AQ96RL7 RNU6-166P-201ENST00000384371 107 ntBASIC-3.2□□□□□ -2.92
VPS13AQ96RL7 Y_RNA.504-201ENST00000384481 104 ntBASIC-3.2□□□□□ -2.92
VPS13AQ96RL7 RNU6-131P-201ENST00000391144 107 ntBASIC-3.21□□□□□ -2.92
VPS13AQ96RL7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-3.21□□□□□ -2.92
VPS13AQ96RL7 AC011374.2-201ENST00000607135 526 ntBASIC-3.21□□□□□ -2.92
VPS13AQ96RL7 RNU7-182P-201ENST00000459009 62 ntBASIC-3.21□□□□□ -2.92
VPS13AQ96RL7 RNU6-978P-201ENST00000364371 103 ntBASIC-3.22□□□□□ -2.92
VPS13AQ96RL7 PIGPP4-201ENST00000584447 307 ntBASIC-3.22□□□□□ -2.92
VPS13AQ96RL7 RNU6-697P-201ENST00000363348 107 ntBASIC-3.22□□□□□ -2.92
VPS13AQ96RL7 snoU2-30.1-201ENST00000365012 70 ntBASIC-3.22□□□□□ -2.92
VPS13AQ96RL7 Y_RNA.368-201ENST00000365547 113 ntBASIC-3.22□□□□□ -2.92
VPS13AQ96RL7 MTCO2P6-201ENST00000463134 685 ntBASIC-3.22□□□□□ -2.92
VPS13AQ96RL7 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-3.22□□□□□ -2.92
VPS13AQ96RL7 RNU6-531P-201ENST00000516694 104 ntBASIC-3.22□□□□□ -2.92
VPS13AQ96RL7 RNU6-454P-201ENST00000364292 107 ntBASIC-3.22□□□□□ -2.93
VPS13AQ96RL7 Y_RNA.486-201ENST00000384398 107 ntBASIC-3.22□□□□□ -2.93
VPS13AQ96RL7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-3.22□□□□□ -2.93
VPS13AQ96RL7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-3.22□□□□□ -2.93
VPS13AQ96RL7 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.22□□□□□ -2.93
VPS13AQ96RL7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-3.23□□□□□ -2.93
VPS13AQ96RL7 SNORD39.3-201ENST00000584451 71 ntBASIC-3.23□□□□□ -2.93
VPS13AQ96RL7 MTCO1P29-201ENST00000496868 288 ntBASIC-3.24□□□□□ -2.93
VPS13AQ96RL7 RNU6-608P-201ENST00000383927 104 ntBASIC-3.24□□□□□ -2.93
VPS13AQ96RL7 MIR1305-201ENST00000408300 86 ntBASIC-3.24□□□□□ -2.93
VPS13AQ96RL7 RNY3P13-201ENST00000365542 102 ntBASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 Y_RNA.709-201ENST00000516952 92 ntBASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 RNA5SP454-201ENST00000517231 127 ntBASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 Y_RNA.46-201ENST00000362695 102 ntBASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 RNU5A-5P-201ENST00000411054 116 ntBASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 RNU6-325P-201ENST00000411132 105 ntBASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 MTCO2P11-201ENST00000431069 680 ntBASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 RNU7-172P-201ENST00000517125 64 ntBASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-3.25□□□□□ -2.93
VPS13AQ96RL7 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.26□□□□□ -2.93
VPS13AQ96RL7 AC026410.2-201ENST00000460281 156 ntBASIC-3.26□□□□□ -2.93
VPS13AQ96RL7 MIR1255B2-201ENST00000408618 67 ntBASIC-3.26□□□□□ -2.93
VPS13AQ96RL7 ELOCP4-201ENST00000420090 333 ntBASIC-3.26□□□□□ -2.93
VPS13AQ96RL7 RNU6-560P-201ENST00000364007 108 ntBASIC-3.26□□□□□ -2.93
VPS13AQ96RL7 RNU4-17P-201ENST00000365598 141 ntBASIC-3.26□□□□□ -2.93
VPS13AQ96RL7 MIR522-201ENST00000385071 87 ntBASIC-3.27□□□□□ -2.93
VPS13AQ96RL7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-3.27□□□□□ -2.93
VPS13AQ96RL7 AL365203.2-201ENST00000423444 196 ntBASIC-3.27□□□□□ -2.93
VPS13AQ96RL7 AL136370.1-201ENST00000608166 691 ntBASIC-3.27□□□□□ -2.93
VPS13AQ96RL7 MIR369-201ENST00000362155 70 ntBASIC-3.28□□□□□ -2.93
VPS13AQ96RL7 MIR548Q-201ENST00000408404 100 ntBASIC-3.28□□□□□ -2.93
VPS13AQ96RL7 AC004866.1-201ENST00000411748 78 ntBASIC-3.28□□□□□ -2.93
VPS13AQ96RL7 MTND1P24-201ENST00000552175 861 ntBASIC-3.28□□□□□ -2.93
VPS13AQ96RL7 Y_RNA.33-201ENST00000362591 102 ntBASIC-3.28□□□□□ -2.94
VPS13AQ96RL7 MTCO3P19-201ENST00000415864 321 ntBASIC-3.28□□□□□ -2.94
VPS13AQ96RL7 AC244670.1-201ENST00000436879 112 ntBASIC-3.28□□□□□ -2.94
VPS13AQ96RL7 RNU6-830P-201ENST00000516353 107 ntBASIC-3.28□□□□□ -2.94
VPS13AQ96RL7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-3.28□□□□□ -2.94
VPS13AQ96RL7 AC008507.2-201ENST00000588402 1176 ntBASIC-3.28□□□□□ -2.94
VPS13AQ96RL7 AL133215.3-201ENST00000609801 448 ntBASIC-3.28□□□□□ -2.94
VPS13AQ96RL7 TPTEP1-208ENST00000636884 213 ntBASIC-3.28□□□□□ -2.94
VPS13AQ96RL7 SNORD115-7-201ENST00000365306 82 ntBASIC-3.29□□□□□ -2.94
VPS13AQ96RL7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-3.29□□□□□ -2.94
VPS13AQ96RL7 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.29□□□□□ -2.94
VPS13AQ96RL7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-3.29□□□□□ -2.94
VPS13AQ96RL7 SNORD115-14-201ENST00000363090 81 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 SNORA51.5-201ENST00000384126 131 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 Y_RNA.623-201ENST00000411128 95 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 TRAJ51-201ENST00000504127 63 ntBASIC-3.3□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms