Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CITED4Q96RK1 RNU6-661P-201ENST00000362409 107 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 Y_RNA.362-201ENST00000365518 110 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CITED4Q96RK1 HMGN1P33-201ENST00000432945 451 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 snoU13.16-201ENST00000459350 104 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 RN7SL429P-201ENST00000479090 223 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 RN7SL489P-201ENST00000486185 223 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 RN7SL327P-201ENST00000488659 223 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 RN7SL853P-201ENST00000617250 223 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 MIR8063-201ENST00000621930 81 ntBASIC2.42□□□□□ -2.02
CITED4Q96RK1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CITED4Q96RK1 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 Y_RNA.49-201ENST00000362714 112 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 Y_RNA.85-201ENST00000363014 111 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 SNORA5B-201ENST00000363786 132 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 SNORA1.1-201ENST00000364671 133 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CITED4Q96RK1 MIR17-201ENST00000385012 84 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 AL139132.1-201ENST00000431587 344 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 AL031737.1-201ENST00000450125 223 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.41□□□□□ -2.02
CITED4Q96RK1 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 AL020996.3-201ENST00000606617 222 ntBASIC2.41□□□□□ -2.02
CITED4Q96RK1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.02
CITED4Q96RK1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.02
CITED4Q96RK1 MIR450A1-201ENST00000362262 91 ntBASIC2.4□□□□□ -2.03
CITED4Q96RK1 RNU6-147P-201ENST00000383983 107 ntBASIC2.4□□□□□ -2.03
CITED4Q96RK1 MIR548D2-201ENST00000384955 97 ntBASIC2.4□□□□□ -2.03
CITED4Q96RK1 MIR653-201ENST00000385279 96 ntBASIC2.4□□□□□ -2.03
CITED4Q96RK1 SNORA9.3-201ENST00000516383 129 ntBASIC2.4□□□□□ -2.03
CITED4Q96RK1 RNA5SP33-201ENST00000516687 98 ntBASIC2.4□□□□□ -2.03
CITED4Q96RK1 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
CITED4Q96RK1 MIR2682-201ENST00000580305 110 ntBASIC2.4□□□□□ -2.03
CITED4Q96RK1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.4□□□□□ -2.03
CITED4Q96RK1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CITED4Q96RK1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.4□□□□□ -2.03
CITED4Q96RK1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CITED4Q96RK1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.4□□□□□ -2.03
CITED4Q96RK1 RNU6-301P-201ENST00000384277 107 ntBASIC2.39□□□□□ -2.03
CITED4Q96RK1 RPS3AP1-201ENST00000413190 320 ntBASIC2.39□□□□□ -2.03
CITED4Q96RK1 AL161935.2-201ENST00000414627 60 ntBASIC2.39□□□□□ -2.03
CITED4Q96RK1 RNU6-947P-201ENST00000516264 106 ntBASIC2.39□□□□□ -2.03
CITED4Q96RK1 MIR4679-2-201ENST00000578358 77 ntBASIC2.39□□□□□ -2.03
CITED4Q96RK1 MIR4251-201ENST00000635819 61 ntBASIC2.39□□□□□ -2.03
CITED4Q96RK1 Y_RNA.344-201ENST00000365381 112 ntBASIC2.38□□□□□ -2.03
CITED4Q96RK1 SNORA44-201ENST00000384584 132 ntBASIC2.38□□□□□ -2.03
CITED4Q96RK1 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
CITED4Q96RK1 SNORA26.6-201ENST00000391256 115 ntBASIC2.38□□□□□ -2.03
CITED4Q96RK1 AC022254.1-201ENST00000567857 235 ntBASIC2.38□□□□□ -2.03
CITED4Q96RK1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.37□□□□□ -2.03
CITED4Q96RK1 Y_RNA.299-201ENST00000364973 94 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 MIR1302-5-201ENST00000408164 150 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 RN7SL863P-201ENST00000462370 296 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 RPL39P34-201ENST00000477141 156 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 RNU7-41P-201ENST00000515917 61 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 SNORD111.1-201ENST00000516421 86 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 RNU6-1258P-201ENST00000516911 111 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 AL137790.1-201ENST00000634283 177 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 WWP1P1-201ENST00000466609 2769 ntBASIC2.37□□□□□ -2.03
CITED4Q96RK1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CITED4Q96RK1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.36□□□□□ -2.03
CITED4Q96RK1 RPS23P4-201ENST00000487908 423 ntBASIC2.36□□□□□ -2.03
CITED4Q96RK1 AC113410.1-201ENST00000505029 247 ntBASIC2.36□□□□□ -2.03
CITED4Q96RK1 RN7SKP132-201ENST00000516001 208 ntBASIC2.36□□□□□ -2.03
CITED4Q96RK1 SNORA77B-201ENST00000578179 125 ntBASIC2.36□□□□□ -2.03
CITED4Q96RK1 MIR3613-201ENST00000579844 87 ntBASIC2.36□□□□□ -2.03
CITED4Q96RK1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CITED4Q96RK1 RNU6-1014P-201ENST00000383940 103 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 Y_RNA.470-201ENST00000384307 117 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 RNU6-106P-201ENST00000384405 107 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 MIR512-1-201ENST00000384913 84 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 RNU6-554P-201ENST00000410466 106 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 RNU4-69P-201ENST00000410677 143 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 RPL39P25-201ENST00000449384 154 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 HSPE1P24-201ENST00000450782 238 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 snoU13.9-201ENST00000458927 103 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 CYP3A52P-201ENST00000563326 91 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 UBL5P2-201ENST00000583788 219 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.35□□□□□ -2.03
CITED4Q96RK1 AC007318.2-201ENST00000620999 243 ntBASIC2.35□□□□□ -2.03
CITED4Q96RK1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CITED4Q96RK1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CITED4Q96RK1 Y_RNA.309-201ENST00000365046 111 ntBASIC2.34□□□□□ -2.03
CITED4Q96RK1 SNORA32-201ENST00000384072 121 ntBASIC2.34□□□□□ -2.03
CITED4Q96RK1 HMGN2P19-201ENST00000425149 265 ntBASIC2.34□□□□□ -2.03
CITED4Q96RK1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.34□□□□□ -2.03
CITED4Q96RK1 AC068339.1-201ENST00000526965 141 ntBASIC2.34□□□□□ -2.03
CITED4Q96RK1 MIR3935-201ENST00000583472 104 ntBASIC2.34□□□□□ -2.03
CITED4Q96RK1 AL033523.1-201ENST00000605153 153 ntBASIC2.34□□□□□ -2.03
CITED4Q96RK1 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
CITED4Q96RK1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.34□□□□□ -2.03
CITED4Q96RK1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.34□□□□□ -2.04
CITED4Q96RK1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CITED4Q96RK1 Y_RNA.163-201ENST00000363702 113 ntBASIC2.33□□□□□ -2.04
CITED4Q96RK1 U8.6-201ENST00000364939 135 ntBASIC2.33□□□□□ -2.04
CITED4Q96RK1 RNA5SP126-201ENST00000365092 109 ntBASIC2.33□□□□□ -2.04
CITED4Q96RK1 Y_RNA.354-201ENST00000365448 111 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms