Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RPS27P29-201ENST00000463110 252 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 AL163195.1-201ENST00000496941 348 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 RNA5SP458-201ENST00000516188 119 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 RNA5SP24-201ENST00000516478 95 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 RNU7-181P-201ENST00000517234 74 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 MIR6717-201ENST00000622747 73 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 MFSD8-233ENST00000641482 4860 ntBASIC3.13□□□□□ -1.91
CNTNAP3BQ96NU0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 AL356274.2-201ENST00000624379 3752 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 Y_RNA.338-201ENST00000365320 114 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 SNORA25B-201ENST00000365507 128 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 MIR1267-201ENST00000408723 78 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-687P-201ENST00000516443 89 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-448P-201ENST00000517052 107 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 AC046143.2-201ENST00000609789 160 ntBASIC3.12□□□□□ -1.91
CNTNAP3BQ96NU0 SNORA63.2-201ENST00000362603 126 ntBASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-519P-201ENST00000410590 108 ntBASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 AC006989.1-201ENST00000427212 131 ntBASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 AC104332.2-201ENST00000429959 156 ntBASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 RNU7-28P-201ENST00000516759 62 ntBASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 FAM106DP-201ENST00000586416 501 ntBASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 AC096644.4-201ENST00000563417 2912 ntBASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNTNAP3BQ96NU0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 RNA5SP133-201ENST00000363368 119 ntBASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 Y_RNA.532-201ENST00000384590 113 ntBASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 RNA5SP261-201ENST00000410536 106 ntBASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-1190P-201ENST00000410811 104 ntBASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 CST2P1-201ENST00000425770 87 ntBASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 AL139132.1-201ENST00000431587 344 ntBASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
CNTNAP3BQ96NU0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 MIRLET7C-201ENST00000362160 84 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-424P-201ENST00000384367 105 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 AC015922.2-201ENST00000435593 184 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 SPINT5P-201ENST00000448174 155 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 SNORD4B-201ENST00000459083 72 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 RNU6-1116P-201ENST00000517269 99 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 DNAJC19P9-201ENST00000555084 351 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 AC012676.2-201ENST00000619258 186 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 SNORA50A-202ENST00000629536 136 ntBASIC3.09□□□□□ -1.91
CNTNAP3BQ96NU0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CNTNAP3BQ96NU0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 RNU6-461P-201ENST00000364195 107 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 SNORA24-201ENST00000384096 131 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 RNU6-480P-201ENST00000384332 107 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 RNU6-649P-201ENST00000384463 107 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 SNORA2B-201ENST00000384583 137 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 RNU6-380P-201ENST00000410207 107 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 AL606517.2-201ENST00000442855 241 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 RN7SL297P-201ENST00000483161 293 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 RNU7-35P-201ENST00000517174 62 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 SNORD53-201ENST00000579969 78 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 SNORD3E-202ENST00000627253 216 ntBASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTNAP3BQ96NU0 Y_RNA.168-201ENST00000363740 102 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 Y_RNA.355-201ENST00000365462 98 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 RNU6-471P-201ENST00000383944 106 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 MIR196B-201ENST00000384852 84 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 snoU13.11-201ENST00000459219 104 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 RNU7-53P-201ENST00000516705 60 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 RNU6-958P-201ENST00000516995 106 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 UBL5P2-201ENST00000583788 219 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 AL020996.3-201ENST00000606617 222 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 AC027279.3-201ENST00000625055 122 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 MAPK10-362ENST00000641864 4484 ntBASIC3.07□□□□□ -1.92
CNTNAP3BQ96NU0 MIR30E-201ENST00000362104 92 ntBASIC3.06□□□□□ -1.92
CNTNAP3BQ96NU0 RNU6-865P-201ENST00000364772 107 ntBASIC3.06□□□□□ -1.92
CNTNAP3BQ96NU0 SNORA70.7-201ENST00000384159 133 ntBASIC3.06□□□□□ -1.92
CNTNAP3BQ96NU0 Y_RNA.448-201ENST00000384185 108 ntBASIC3.06□□□□□ -1.92
CNTNAP3BQ96NU0 RNU6-163P-201ENST00000384396 106 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms