Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.38□□□□□ -1.87
TRIM47Q96LD4 SPINT5P-201ENST00000448174 155 ntBASIC3.38□□□□□ -1.87
TRIM47Q96LD4 snoU13.11-201ENST00000459219 104 ntBASIC3.38□□□□□ -1.87
TRIM47Q96LD4 RNA5SP112-201ENST00000515937 99 ntBASIC3.38□□□□□ -1.87
TRIM47Q96LD4 RNU6-687P-201ENST00000516443 89 ntBASIC3.38□□□□□ -1.87
TRIM47Q96LD4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM47Q96LD4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.38□□□□□ -1.87
TRIM47Q96LD4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRIM47Q96LD4 RN7SL633P-201ENST00000488974 297 ntBASIC3.37□□□□□ -1.87
TRIM47Q96LD4 RNU6-70P-201ENST00000516438 60 ntBASIC3.37□□□□□ -1.87
TRIM47Q96LD4 RNU6-826P-201ENST00000516827 104 ntBASIC3.37□□□□□ -1.87
TRIM47Q96LD4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM47Q96LD4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM47Q96LD4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM47Q96LD4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM47Q96LD4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM47Q96LD4 Y_RNA.332-201ENST00000365271 113 ntBASIC3.36□□□□□ -1.87
TRIM47Q96LD4 SNORD30.1-201ENST00000391309 70 ntBASIC3.36□□□□□ -1.87
TRIM47Q96LD4 RNU7-94P-201ENST00000459576 63 ntBASIC3.36□□□□□ -1.87
TRIM47Q96LD4 RNU6-1041P-201ENST00000516254 102 ntBASIC3.36□□□□□ -1.87
TRIM47Q96LD4 IGLV3-17-201ENST00000519099 244 ntBASIC3.36□□□□□ -1.87
TRIM47Q96LD4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM47Q96LD4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.36□□□□□ -1.87
TRIM47Q96LD4 CTSLP2-204ENST00000629029 392 ntBASIC3.36□□□□□ -1.87
TRIM47Q96LD4 MIR338-201ENST00000636369 67 ntBASIC3.36□□□□□ -1.87
TRIM47Q96LD4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TRIM47Q96LD4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM47Q96LD4 SNORA63.2-201ENST00000362603 126 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 Y_RNA.173-201ENST00000363776 113 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 RNA5SP323-201ENST00000391094 133 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 RNA5SP252-201ENST00000391131 119 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 RN7SKP192-201ENST00000411291 327 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 RNA5SP380-201ENST00000517190 98 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 RNU7-181P-201ENST00000517234 74 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 MIR4484-201ENST00000582855 83 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 AC007318.2-201ENST00000620999 243 ntBASIC3.35□□□□□ -1.87
TRIM47Q96LD4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM47Q96LD4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM47Q96LD4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRIM47Q96LD4 RNU6-471P-201ENST00000383944 106 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 SNORA8-201ENST00000384574 139 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 Y_RNA.532-201ENST00000384590 113 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 MIR504-201ENST00000385065 83 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 MIR887-201ENST00000401258 79 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.34□□□□□ -1.87
TRIM47Q96LD4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 AL513328.1-201ENST00000446460 224 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 AC008413.1-201ENST00000511864 177 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 Y_RNA.681-201ENST00000516445 113 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 MIR4524B-201ENST00000581569 115 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 U6.111-201ENST00000636093 83 ntBASIC3.34□□□□□ -1.87
TRIM47Q96LD4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.33□□□□□ -1.88
TRIM47Q96LD4 RNU6-161P-201ENST00000363051 106 ntBASIC3.33□□□□□ -1.88
TRIM47Q96LD4 RNU6-865P-201ENST00000364772 107 ntBASIC3.33□□□□□ -1.88
TRIM47Q96LD4 RNU6-480P-201ENST00000384332 107 ntBASIC3.33□□□□□ -1.88
TRIM47Q96LD4 SNORA26.6-201ENST00000391256 115 ntBASIC3.33□□□□□ -1.88
TRIM47Q96LD4 MIR1267-201ENST00000408723 78 ntBASIC3.33□□□□□ -1.88
TRIM47Q96LD4 RNU6-991P-201ENST00000516168 107 ntBASIC3.33□□□□□ -1.88
TRIM47Q96LD4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.33□□□□□ -1.88
TRIM47Q96LD4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM47Q96LD4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TRIM47Q96LD4 RNU6-546P-201ENST00000383991 107 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 Y_RNA.448-201ENST00000384185 108 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 RNU6-540P-201ENST00000384622 101 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 RNA5SP482-201ENST00000391269 118 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 AL031183.1-201ENST00000457667 207 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 snoU13.26-201ENST00000459452 105 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 AP004217.1-201ENST00000480579 346 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 AC006483.1-201ENST00000487308 313 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 MIR4769-201ENST00000584126 77 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 AC012676.2-201ENST00000619258 186 ntBASIC3.32□□□□□ -1.88
TRIM47Q96LD4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM47Q96LD4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM47Q96LD4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM47Q96LD4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM47Q96LD4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRIM47Q96LD4 SNORA9.2-201ENST00000365361 133 ntBASIC3.31□□□□□ -1.88
TRIM47Q96LD4 RNU6-424P-201ENST00000384367 105 ntBASIC3.31□□□□□ -1.88
TRIM47Q96LD4 RNA5SP261-201ENST00000410536 106 ntBASIC3.31□□□□□ -1.88
TRIM47Q96LD4 RNU6-1190P-201ENST00000410811 104 ntBASIC3.31□□□□□ -1.88
TRIM47Q96LD4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM47Q96LD4 RNU6-1108P-201ENST00000516308 104 ntBASIC3.31□□□□□ -1.88
TRIM47Q96LD4 FAM106DP-201ENST00000586416 501 ntBASIC3.31□□□□□ -1.88
TRIM47Q96LD4 SNORD3E-202ENST00000627253 216 ntBASIC3.31□□□□□ -1.88
TRIM47Q96LD4 AC092435.3-201ENST00000565538 3654 ntBASIC3.31□□□□□ -1.88
TRIM47Q96LD4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TRIM47Q96LD4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM47Q96LD4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
TRIM47Q96LD4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM47Q96LD4 AC108206.1-201ENST00000570186 4159 ntBASIC3.3□□□□□ -1.88
TRIM47Q96LD4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM47Q96LD4 RNA5SP138-201ENST00000365098 114 ntBASIC3.3□□□□□ -1.88
TRIM47Q96LD4 RNU6-499P-201ENST00000365615 107 ntBASIC3.3□□□□□ -1.88
TRIM47Q96LD4 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
TRIM47Q96LD4 RNU2-63P-201ENST00000410792 194 ntBASIC3.3□□□□□ -1.88
TRIM47Q96LD4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM47Q96LD4 SNORD4B-201ENST00000459083 72 ntBASIC3.3□□□□□ -1.88
TRIM47Q96LD4 MIR6717-201ENST00000622747 73 ntBASIC3.3□□□□□ -1.88
TRIM47Q96LD4 RNU6-859P-201ENST00000362728 107 ntBASIC3.29□□□□□ -1.88
TRIM47Q96LD4 SNORA2B-201ENST00000384583 137 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms