Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
PDLIM2Q96JY6 SNORA63D-201ENST00000364359 132 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.528-201ENST00000384575 108 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 RNU6-950P-201ENST00000384651 107 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 U8.16-201ENST00000391279 133 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 RNU6-938P-201ENST00000411285 103 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 RNU6-240P-201ENST00000516098 97 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 SNORA18.7-201ENST00000516910 131 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 AC027279.3-201ENST00000625055 122 ntBASIC1.92□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 MIR520A-201ENST00000384862 85 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 MIR676-201ENST00000390702 67 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 SNORA48.1-201ENST00000390879 135 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 MIR1261-201ENST00000408659 82 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 RNA5SP270-201ENST00000411361 118 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 AC087499.4-201ENST00000448505 178 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 RNA5SP168-201ENST00000516642 112 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 AP003484.1-201ENST00000530974 250 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 SNORD14A-201ENST00000606526 91 ntBASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
PDLIM2Q96JY6 Y_RNA.351-201ENST00000365436 96 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 Y_RNA.440-201ENST00000384120 114 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RNU6-424P-201ENST00000384367 105 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RNA5SP501-201ENST00000410990 112 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RPS26P48-201ENST00000491713 339 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RNU7-12P-201ENST00000516030 62 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 SUB1P4-201ENST00000566062 339 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
PDLIM2Q96JY6 RNU1-133P-201ENST00000364867 167 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RNU6-690P-201ENST00000365242 106 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RNU6-1031P-201ENST00000384773 107 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 MIR9-3-201ENST00000385084 90 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RNA5SP136-201ENST00000410906 107 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 AC063976.4-201ENST00000421971 163 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 AC015922.2-201ENST00000435593 184 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 RPL23AP63-201ENST00000498752 471 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PDLIM2Q96JY6 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNU6-833P-201ENST00000363486 107 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNU6-880P-201ENST00000384526 107 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNU7-34P-201ENST00000459394 64 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNU7-80P-201ENST00000459562 61 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 RNA5SP437-201ENST00000517249 129 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 AL596211.1-201ENST00000569873 2277 ntBASIC1.88□□□□□ -2.11
PDLIM2Q96JY6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 MIR342-201ENST00000362212 99 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 RNU6-112P-201ENST00000363599 104 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 RNU6-755P-201ENST00000364400 103 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 MIR320A-201ENST00000385302 82 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 AL627390.1-201ENST00000396055 340 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 SNX2P2-201ENST00000424553 323 ntBASIC1.87□□□□□ -2.11
PDLIM2Q96JY6 RNU6-349P-201ENST00000362402 107 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 SNORA3A-201ENST00000364113 130 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 RNY1P6-201ENST00000384193 109 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 Y_RNA.454-201ENST00000384224 113 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 RNU6-296P-201ENST00000384608 107 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 U8.17-201ENST00000391292 132 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 AC003989.2-201ENST00000440224 169 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 AC093850.1-201ENST00000454121 251 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 RNU6-830P-201ENST00000516353 107 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 MIR4709-201ENST00000577272 72 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 AC021443.1-201ENST00000604478 211 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 U1.36-201ENST00000620684 176 ntBASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.86□□□□□ -2.11
PDLIM2Q96JY6 SNORA27-201ENST00000384323 126 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 MIR570-201ENST00000384917 97 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 MIR516B2-201ENST00000385190 85 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 COX6CP6-201ENST00000490840 228 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 RNA5SP481-201ENST00000516814 122 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 RNU7-181P-201ENST00000517234 74 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 AC007012.1-201ENST00000567192 175 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 MIR4778-201ENST00000577635 80 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 AC091932.4-201ENST00000623386 200 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
PDLIM2Q96JY6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 MIR452-201ENST00000385020 85 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 MIR1267-201ENST00000408723 78 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 snoU13.27-201ENST00000459278 104 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 snoU13.15-201ENST00000459407 104 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 snoU13.26-201ENST00000459452 105 ntBASIC1.84□□□□□ -2.11
PDLIM2Q96JY6 UBL5P3-201ENST00000475112 231 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms