Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 MIR4305-201ENST00000583252 102 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 AC015726.2-201ENST00000620112 122 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 MIR2052-201ENST00000636055 55 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 MIR1245B-201ENST00000636115 69 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SHISA4Q96DD7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SHISA4Q96DD7 RNU6-23P-201ENST00000363283 107 ntBASIC2.52□□□□□ -2.01
SHISA4Q96DD7 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
SHISA4Q96DD7 MIR488-201ENST00000365739 83 ntBASIC2.52□□□□□ -2.01
SHISA4Q96DD7 SNORD38C-201ENST00000384381 69 ntBASIC2.52□□□□□ -2.01
SHISA4Q96DD7 MIR548D2-201ENST00000384955 97 ntBASIC2.52□□□□□ -2.01
SHISA4Q96DD7 RNU6-938P-201ENST00000411285 103 ntBASIC2.52□□□□□ -2.01
SHISA4Q96DD7 RNU6-592P-201ENST00000411333 103 ntBASIC2.52□□□□□ -2.01
SHISA4Q96DD7 AP003327.1-201ENST00000529684 127 ntBASIC2.52□□□□□ -2.01
SHISA4Q96DD7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SHISA4Q96DD7 ICE2P2-201ENST00000483823 2787 ntBASIC2.51□□□□□ -2.01
SHISA4Q96DD7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHISA4Q96DD7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SHISA4Q96DD7 MIR590-201ENST00000385008 97 ntBASIC2.51□□□□□ -2.01
SHISA4Q96DD7 RNU7-26P-201ENST00000458980 63 ntBASIC2.51□□□□□ -2.01
SHISA4Q96DD7 AC104435.1-201ENST00000483483 166 ntBASIC2.51□□□□□ -2.01
SHISA4Q96DD7 RNU7-123P-201ENST00000515911 60 ntBASIC2.51□□□□□ -2.01
SHISA4Q96DD7 SNORA28-201ENST00000606769 126 ntBASIC2.51□□□□□ -2.01
SHISA4Q96DD7 AC091932.4-201ENST00000623386 200 ntBASIC2.51□□□□□ -2.01
SHISA4Q96DD7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
SHISA4Q96DD7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHISA4Q96DD7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHISA4Q96DD7 MT-TI-201ENST00000387365 69 ntBASIC2.5□□□□□ -2.01
SHISA4Q96DD7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.5□□□□□ -2.01
SHISA4Q96DD7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.5□□□□□ -2.01
SHISA4Q96DD7 AC026271.5-201ENST00000577873 130 ntBASIC2.5□□□□□ -2.01
SHISA4Q96DD7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
SHISA4Q96DD7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHISA4Q96DD7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHISA4Q96DD7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SHISA4Q96DD7 Y_RNA.220-201ENST00000364244 109 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 Y_RNA.344-201ENST00000365381 112 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 RNU6-163P-201ENST00000384396 106 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 RPS3AP1-201ENST00000413190 320 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 RNU6-109P-201ENST00000516364 107 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 RNU6-184P-201ENST00000516514 107 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 RNU6-158P-201ENST00000517104 100 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 AC141557.1-201ENST00000540982 400 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.49□□□□□ -2.01
SHISA4Q96DD7 MIR3169-201ENST00000578032 83 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 FO624990.1-201ENST00000636373 85 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 AL162726.3-218ENST00000636401 95 ntBASIC2.49□□□□□ -2.01
SHISA4Q96DD7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SHISA4Q96DD7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SHISA4Q96DD7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SHISA4Q96DD7 MIR337-201ENST00000362281 93 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 RNU6-1104P-201ENST00000384723 104 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 RNY1P7-201ENST00000384743 110 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 MIR518E-201ENST00000385252 88 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 RNA5SP109-201ENST00000391010 116 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 MIR1912-201ENST00000410389 80 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 AL035398.1-201ENST00000430869 322 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 STAG3L5P-204ENST00000443759 179 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 RPL39P25-201ENST00000449384 154 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 AC114811.1-201ENST00000507207 168 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 RNA5SP200-201ENST00000516360 103 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 AC078899.2-201ENST00000595282 212 ntBASIC2.48□□□□□ -2.01
SHISA4Q96DD7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHISA4Q96DD7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SHISA4Q96DD7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.47□□□□□ -2.01
SHISA4Q96DD7 MIR342-201ENST00000362212 99 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 SNORA67.1-201ENST00000364749 141 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 RNU6-424P-201ENST00000384367 105 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 SNX2P2-201ENST00000424553 323 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 MTATP8P2-201ENST00000435212 202 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 AL606517.2-201ENST00000442855 241 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 RNU6-904P-201ENST00000516206 101 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 RNU7-6P-201ENST00000516845 62 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 AC022523.2-201ENST00000561045 150 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 MIR8054-201ENST00000620877 86 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 AC027279.3-201ENST00000625055 122 ntBASIC2.47□□□□□ -2.01
SHISA4Q96DD7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.46□□□□□ -2.01
SHISA4Q96DD7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.46□□□□□ -2.02
SHISA4Q96DD7 SNORA63D-201ENST00000364359 132 ntBASIC2.46□□□□□ -2.02
SHISA4Q96DD7 SNORA27-201ENST00000384323 126 ntBASIC2.46□□□□□ -2.02
SHISA4Q96DD7 RNU2-35P-201ENST00000516446 142 ntBASIC2.46□□□□□ -2.02
SHISA4Q96DD7 MIR4658-201ENST00000584344 65 ntBASIC2.46□□□□□ -2.02
SHISA4Q96DD7 AC005786.1-201ENST00000588553 154 ntBASIC2.46□□□□□ -2.02
SHISA4Q96DD7 AL049779.4-201ENST00000604500 156 ntBASIC2.46□□□□□ -2.02
SHISA4Q96DD7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.46□□□□□ -2.02
SHISA4Q96DD7 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.02
SHISA4Q96DD7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHISA4Q96DD7 MIR302B-201ENST00000362188 73 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 Y_RNA.93-201ENST00000363066 109 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 RNU4-36P-201ENST00000364294 144 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 Y_RNA.241-201ENST00000364470 117 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 MIR29C-201ENST00000385231 88 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 RNU6-816P-201ENST00000390914 107 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 RNU6-1268P-201ENST00000391214 107 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 RNU6-1239P-201ENST00000391310 107 ntBASIC2.45□□□□□ -2.02
SHISA4Q96DD7 RN7SKP200-201ENST00000410564 320 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms