Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MIR518F-201ENST00000384973 87 ntBASIC1.7□□□□□ -2.14
HPS3Q969F9 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
HPS3Q969F9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.7□□□□□ -2.14
HPS3Q969F9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.7□□□□□ -2.14
HPS3Q969F9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.7□□□□□ -2.14
HPS3Q969F9 RNU4-57P-201ENST00000515980 135 ntBASIC1.7□□□□□ -2.14
HPS3Q969F9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HPS3Q969F9 Y_RNA.337-201ENST00000365312 102 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 Y_RNA.542-201ENST00000384641 111 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 MIR548A2-201ENST00000384956 97 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HPS3Q969F9 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 RNU6-947P-201ENST00000516264 106 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 SNORD111.1-201ENST00000516421 86 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 RNU7-181P-201ENST00000517234 74 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 AC007751.1-201ENST00000529260 376 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 BX248123.2-201ENST00000606318 124 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 FTX_2.1-201ENST00000618816 94 ntBASIC1.69□□□□□ -2.14
HPS3Q969F9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
HPS3Q969F9 Y_RNA.37-201ENST00000362606 108 ntBASIC1.68□□□□□ -2.14
HPS3Q969F9 MIR499A-201ENST00000384903 122 ntBASIC1.68□□□□□ -2.14
HPS3Q969F9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
HPS3Q969F9 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
HPS3Q969F9 RNU4-62P-201ENST00000410125 130 ntBASIC1.68□□□□□ -2.14
HPS3Q969F9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.68□□□□□ -2.14
HPS3Q969F9 MIR4764-201ENST00000580680 88 ntBASIC1.68□□□□□ -2.14
HPS3Q969F9 MIR4303-201ENST00000581299 66 ntBASIC1.68□□□□□ -2.14
HPS3Q969F9 MIR548AR-201ENST00000582191 57 ntBASIC1.68□□□□□ -2.14
HPS3Q969F9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.68□□□□□ -2.14
HPS3Q969F9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
HPS3Q969F9 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 SNORA25.7-201ENST00000364375 127 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 SNORA25.9-201ENST00000365087 128 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 RNU6-239P-201ENST00000390990 99 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.67□□□□□ -2.14
HPS3Q969F9 RN7SKP88-201ENST00000516847 250 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 AP003484.1-201ENST00000530974 250 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 SNORD53B-201ENST00000577887 78 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 AP001485.1-201ENST00000604799 199 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 7SK.8-201ENST00000612110 250 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 7SK.11-201ENST00000615477 250 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 7SK.13-201ENST00000622040 250 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.67□□□□□ -2.14
HPS3Q969F9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.67□□□□□ -2.14
HPS3Q969F9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.66□□□□□ -2.14
HPS3Q969F9 RNU4-84P-201ENST00000364200 139 ntBASIC1.66□□□□□ -2.14
HPS3Q969F9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.66□□□□□ -2.14
HPS3Q969F9 AL365205.2-201ENST00000594586 68 ntBASIC1.66□□□□□ -2.14
HPS3Q969F9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-34-201ENST00000362441 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-12-201ENST00000362583 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-29-201ENST00000362834 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-9-201ENST00000362912 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-21-201ENST00000362963 81 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-14-201ENST00000363090 81 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-13-201ENST00000363358 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-41-201ENST00000363608 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-11-201ENST00000363616 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-5-201ENST00000363633 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-39-201ENST00000363694 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-4-201ENST00000363810 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-16-201ENST00000363887 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-6-201ENST00000363942 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-42-201ENST00000364273 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 RNU6-978P-201ENST00000364371 103 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-15-201ENST00000364809 81 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-1-201ENST00000364961 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-26-201ENST00000365067 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-10-201ENST00000365073 81 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-43-201ENST00000365503 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-36-201ENST00000365629 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 RNU6-1292P-201ENST00000383856 107 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 RNU6-1189P-201ENST00000383958 107 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 Y_RNA.441-201ENST00000384123 112 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 RNU6-907P-201ENST00000390924 102 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORA40.5-201ENST00000391061 128 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 AF228730.3-201ENST00000436691 102 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 MIR3129-201ENST00000581095 76 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 SNORD115-40-201ENST00000606510 82 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 MIR8070-201ENST00000616510 88 ntBASIC1.65□□□□□ -2.15
HPS3Q969F9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HPS3Q969F9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HPS3Q969F9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HPS3Q969F9 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
HPS3Q969F9 RNU6-597P-201ENST00000365620 102 ntBASIC1.64□□□□□ -2.15
HPS3Q969F9 Y_RNA.393-201ENST00000383936 102 ntBASIC1.64□□□□□ -2.15
HPS3Q969F9 SNORA1-201ENST00000384107 130 ntBASIC1.64□□□□□ -2.15
HPS3Q969F9 RNU6-1135P-201ENST00000411083 103 ntBASIC1.64□□□□□ -2.15
HPS3Q969F9 SNORA18.4-201ENST00000516440 124 ntBASIC1.64□□□□□ -2.15
HPS3Q969F9 MIR7111-201ENST00000619751 72 ntBASIC1.64□□□□□ -2.15
HPS3Q969F9 MIR8065-201ENST00000620577 100 ntBASIC1.64□□□□□ -2.15
HPS3Q969F9 Y_RNA.150-201ENST00000363562 102 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 SNORA70.7-201ENST00000384159 133 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 RNU6-886P-201ENST00000384319 105 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 Y_RNA.508-201ENST00000384502 114 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms