Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ERCC4Q92889 PGBD4P5-201ENST00000445958 426 ntBASIC2.13□□□□□ -2.07
ERCC4Q92889 RNA5SP57-201ENST00000459463 123 ntBASIC2.13□□□□□ -2.07
ERCC4Q92889 AC022254.1-201ENST00000567857 235 ntBASIC2.13□□□□□ -2.07
ERCC4Q92889 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
ERCC4Q92889 Y_RNA.261-201ENST00000364631 102 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 SNORD18B-201ENST00000365659 72 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 Y_RNA.563-201ENST00000384707 108 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 AL161935.2-201ENST00000414627 60 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 AL158147.1-201ENST00000443970 75 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 RNU6-1333P-201ENST00000516162 93 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 SNORD36C-201ENST00000516733 66 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 RNU6-1149P-201ENST00000516810 97 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 MIR4524B-201ENST00000581569 115 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 AC015726.2-201ENST00000620112 122 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.12□□□□□ -2.07
ERCC4Q92889 ZNF355P-201ENST00000427301 3216 ntBASIC2.12□□□□□ -2.07
ERCC4Q92889 Y_RNA.114-201ENST00000363265 113 ntBASIC2.11□□□□□ -2.07
ERCC4Q92889 Y_RNA.440-201ENST00000384120 114 ntBASIC2.11□□□□□ -2.07
ERCC4Q92889 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ERCC4Q92889 MTATP6P21-201ENST00000440681 189 ntBASIC2.11□□□□□ -2.07
ERCC4Q92889 RPS29P11-201ENST00000496507 171 ntBASIC2.11□□□□□ -2.07
ERCC4Q92889 Y_RNA.712-201ENST00000517011 92 ntBASIC2.11□□□□□ -2.07
ERCC4Q92889 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.11□□□□□ -2.07
ERCC4Q92889 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.1□□□□□ -2.07
ERCC4Q92889 MIR452-201ENST00000385020 85 ntBASIC2.1□□□□□ -2.07
ERCC4Q92889 Y_RNA.617-201ENST00000410920 90 ntBASIC2.1□□□□□ -2.07
ERCC4Q92889 AP003484.1-201ENST00000530974 250 ntBASIC2.1□□□□□ -2.07
ERCC4Q92889 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.1□□□□□ -2.07
ERCC4Q92889 AL022345.2-201ENST00000606307 135 ntBASIC2.1□□□□□ -2.07
ERCC4Q92889 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ERCC4Q92889 RNU6-203P-201ENST00000384038 104 ntBASIC2.09□□□□□ -2.07
ERCC4Q92889 MIR526A1-201ENST00000384897 85 ntBASIC2.09□□□□□ -2.07
ERCC4Q92889 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.09□□□□□ -2.07
ERCC4Q92889 AC093850.1-201ENST00000454121 251 ntBASIC2.09□□□□□ -2.07
ERCC4Q92889 RNU7-107P-201ENST00000459121 61 ntBASIC2.09□□□□□ -2.07
ERCC4Q92889 AC090049.2-201ENST00000550377 109 ntBASIC2.09□□□□□ -2.07
ERCC4Q92889 MIR4713-201ENST00000582691 75 ntBASIC2.09□□□□□ -2.07
ERCC4Q92889 RNU6-1123P-201ENST00000362347 106 ntBASIC2.08□□□□□ -2.08
ERCC4Q92889 SNORA16.1-201ENST00000364597 132 ntBASIC2.08□□□□□ -2.08
ERCC4Q92889 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
ERCC4Q92889 RN7SKP179-201ENST00000516126 217 ntBASIC2.08□□□□□ -2.08
ERCC4Q92889 RNU6-113P-201ENST00000516653 101 ntBASIC2.08□□□□□ -2.08
ERCC4Q92889 DEFB122-202ENST00000569013 197 ntBASIC2.08□□□□□ -2.08
ERCC4Q92889 SNORD3E-202ENST00000627253 216 ntBASIC2.08□□□□□ -2.08
ERCC4Q92889 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ERCC4Q92889 SNORA2.2-201ENST00000365473 135 ntBASIC2.07□□□□□ -2.08
ERCC4Q92889 SNORA40.5-201ENST00000391061 128 ntBASIC2.07□□□□□ -2.08
ERCC4Q92889 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
ERCC4Q92889 RPS26P48-201ENST00000491713 339 ntBASIC2.07□□□□□ -2.08
ERCC4Q92889 MIR4419B-201ENST00000577260 68 ntBASIC2.07□□□□□ -2.08
ERCC4Q92889 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.07□□□□□ -2.08
ERCC4Q92889 SNORD115-34-201ENST00000362441 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-12-201ENST00000362583 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 RNU6-235P-201ENST00000362644 107 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-29-201ENST00000362834 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-9-201ENST00000362912 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 RNU6-1290P-201ENST00000362957 109 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-21-201ENST00000362963 81 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-14-201ENST00000363090 81 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-13-201ENST00000363358 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-41-201ENST00000363608 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-11-201ENST00000363616 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-5-201ENST00000363633 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-39-201ENST00000363694 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-4-201ENST00000363810 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-16-201ENST00000363887 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-6-201ENST00000363942 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 RNU6-647P-201ENST00000364243 107 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-42-201ENST00000364273 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-15-201ENST00000364809 81 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-1-201ENST00000364961 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-26-201ENST00000365067 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-10-201ENST00000365073 81 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-43-201ENST00000365503 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-36-201ENST00000365629 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 Y_RNA.525-201ENST00000384570 113 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 MIR136-201ENST00000385207 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 MIRLET7F2-201ENST00000385277 83 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 RNU6-735P-201ENST00000410612 107 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.06□□□□□ -2.08
ERCC4Q92889 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.06□□□□□ -2.08
ERCC4Q92889 AC024614.2-201ENST00000577584 372 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 MIR4778-201ENST00000577635 80 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 SNORD115-40-201ENST00000606510 82 ntBASIC2.06□□□□□ -2.08
ERCC4Q92889 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ERCC4Q92889 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ERCC4Q92889 SNORD48-201ENST00000364953 64 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 MIR516B2-201ENST00000385190 85 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 U8.17-201ENST00000391292 132 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 Y_RNA.629-201ENST00000411368 105 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 AC004965.1-201ENST00000413033 213 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 AL445685.2-201ENST00000422551 342 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 RNU6-772P-201ENST00000516042 105 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.05□□□□□ -2.08
ERCC4Q92889 AC108081.1-201ENST00000604358 221 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 AC095038.3-201ENST00000634439 195 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 MIR3914-2-201ENST00000637339 95 ntBASIC2.05□□□□□ -2.08
ERCC4Q92889 RNU6-661P-201ENST00000362409 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 258.1 ms