Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 RNA5SP133-201ENST00000363368 119 ntBASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 SNORD114-10-201ENST00000363409 72 ntBASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 SNORA25B-201ENST00000365507 128 ntBASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 MIR136-201ENST00000385207 82 ntBASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 CST9LP2-201ENST00000437612 320 ntBASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 MIR4738-201ENST00000579134 87 ntBASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SNIP1Q8TAD8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 Y_RNA.386-201ENST00000383913 105 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-447P-201ENST00000410293 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-1118P-201ENST00000410382 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-1076P-201ENST00000410397 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-355P-201ENST00000410427 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-791P-201ENST00000410467 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-705P-201ENST00000410601 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-1100P-201ENST00000410691 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-860P-201ENST00000410860 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-1217P-201ENST00000411276 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-785P-201ENST00000411324 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 RNU6-448P-201ENST00000517052 107 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 MIR3945-201ENST00000581853 98 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 U6.90-201ENST00000614007 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 U6.70-201ENST00000620287 104 ntBASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SNIP1Q8TAD8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 RNU6-161P-201ENST00000363051 106 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 MIR452-201ENST00000385020 85 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 RNU6-602P-201ENST00000411155 105 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 MIR3169-201ENST00000578032 83 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 MIR8055-201ENST00000610739 97 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 MIR8065-201ENST00000620577 100 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 AL137790.1-201ENST00000634283 177 ntBASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.16□□□□□ -1.9
SNIP1Q8TAD8 Y_RNA.508-201ENST00000384502 114 ntBASIC3.15□□□□□ -1.91
SNIP1Q8TAD8 AL034345.1-201ENST00000407768 123 ntBASIC3.15□□□□□ -1.91
SNIP1Q8TAD8 SNORA11.4-201ENST00000408823 129 ntBASIC3.15□□□□□ -1.91
SNIP1Q8TAD8 HSPE1P9-201ENST00000440046 311 ntBASIC3.15□□□□□ -1.91
SNIP1Q8TAD8 MIR3162-201ENST00000581818 82 ntBASIC3.15□□□□□ -1.91
SNIP1Q8TAD8 AC009487.2-201ENST00000420969 6821 ntBASIC3.15□□□□□ -1.91
SNIP1Q8TAD8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
SNIP1Q8TAD8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNIP1Q8TAD8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 MIR449A-201ENST00000362113 91 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 Y_RNA.205-201ENST00000364128 113 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 SNORA68.1-201ENST00000364537 132 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 AC093850.1-201ENST00000454121 251 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 SNORD123-201ENST00000459473 70 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 RN7SL863P-201ENST00000462370 296 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 RNU6-70P-201ENST00000516438 60 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 MIR4796-201ENST00000580742 81 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 MIR6715A-201ENST00000615929 79 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 AC022513.1-201ENST00000624512 117 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 AP001362.1-201ENST00000625165 124 ntBASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNIP1Q8TAD8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 RNA5SP432-201ENST00000362480 116 ntBASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 RNU6-23P-201ENST00000363283 107 ntBASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 RNU6-634P-201ENST00000459134 106 ntBASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 RNU6-1108P-201ENST00000516308 104 ntBASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 RNU6-687P-201ENST00000516443 89 ntBASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 MIR3186-201ENST00000577404 85 ntBASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 MIR4484-201ENST00000582855 83 ntBASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 MIR8066-201ENST00000617280 78 ntBASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
SNIP1Q8TAD8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 RNA5SP383-201ENST00000362934 120 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 Y_RNA.354-201ENST00000365448 111 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 RNU6-649P-201ENST00000384463 107 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 Y_RNA.532-201ENST00000384590 113 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 RNU6-987P-201ENST00000384759 104 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 RNU2-59P-201ENST00000410482 191 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 RNU7-85P-201ENST00000458851 63 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 snoU13.16-201ENST00000459350 104 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
SNIP1Q8TAD8 RN7SL330P-201ENST00000469709 307 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms