Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-970P-201ENST00000516312 107 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 AC022523.2-201ENST00000561045 150 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 RNY1P7-201ENST00000384743 110 ntBASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 AL445646.1-201ENST00000431784 216 ntBASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 snoU13.15-201ENST00000459407 104 ntBASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 AC002984.1-201ENST00000591692 448 ntBASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 HSPE1P19-201ENST00000603327 295 ntBASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 MIR7843-201ENST00000622274 79 ntBASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 SNORD3E-202ENST00000627253 216 ntBASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NPAS4Q8IUM7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 RNU6-1123P-201ENST00000362347 106 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 RNU1-133P-201ENST00000364867 167 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 Y_RNA.440-201ENST00000384120 114 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 RNY1P6-201ENST00000384193 109 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 MIR504-201ENST00000385065 83 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 MIR660-201ENST00000385235 97 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 RN7SKP223-201ENST00000410582 62 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 AC244636.1-201ENST00000421152 228 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 AL356320.1-201ENST00000429616 163 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 RNU7-123P-201ENST00000515911 60 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 AC015726.2-201ENST00000620112 122 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 AC010297.1-201ENST00000623948 149 ntBASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS4Q8IUM7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS4Q8IUM7 MIR424-201ENST00000362227 98 ntBASIC2.67□□□□□ -1.98
NPAS4Q8IUM7 Y_RNA.558-201ENST00000384685 113 ntBASIC2.67□□□□□ -1.98
NPAS4Q8IUM7 SNORA18.7-201ENST00000516910 131 ntBASIC2.67□□□□□ -1.98
NPAS4Q8IUM7 AC141557.1-201ENST00000540982 400 ntBASIC2.67□□□□□ -1.98
NPAS4Q8IUM7 MIR4648-201ENST00000580107 72 ntBASIC2.67□□□□□ -1.98
NPAS4Q8IUM7 AL773524.1-201ENST00000614065 229 ntBASIC2.67□□□□□ -1.98
NPAS4Q8IUM7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.67□□□□□ -1.98
NPAS4Q8IUM7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NPAS4Q8IUM7 SNORD114-30-201ENST00000364448 72 ntBASIC2.66□□□□□ -1.98
NPAS4Q8IUM7 Y_RNA.351-201ENST00000365436 96 ntBASIC2.66□□□□□ -1.98
NPAS4Q8IUM7 MIR17-201ENST00000385012 84 ntBASIC2.66□□□□□ -1.98
NPAS4Q8IUM7 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
NPAS4Q8IUM7 RNA5SP82-201ENST00000516707 92 ntBASIC2.66□□□□□ -1.98
NPAS4Q8IUM7 RNU6-1116P-201ENST00000517269 99 ntBASIC2.66□□□□□ -1.98
NPAS4Q8IUM7 AP003484.1-201ENST00000530974 250 ntBASIC2.66□□□□□ -1.98
NPAS4Q8IUM7 AC080100.1-201ENST00000624239 5356 ntBASIC2.65□□□□□ -1.98
NPAS4Q8IUM7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
NPAS4Q8IUM7 RNA5SP456-201ENST00000364002 114 ntBASIC2.65□□□□□ -1.99
NPAS4Q8IUM7 MIR548D2-201ENST00000384955 97 ntBASIC2.65□□□□□ -1.99
NPAS4Q8IUM7 RNU6-237P-201ENST00000515985 71 ntBASIC2.65□□□□□ -1.99
NPAS4Q8IUM7 RNU2-35P-201ENST00000516446 142 ntBASIC2.65□□□□□ -1.99
NPAS4Q8IUM7 MIR4305-201ENST00000583252 102 ntBASIC2.65□□□□□ -1.99
NPAS4Q8IUM7 AC103810.6-201ENST00000606708 136 ntBASIC2.65□□□□□ -1.99
NPAS4Q8IUM7 AC016717.2-201ENST00000609089 5141 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 MIR342-201ENST00000362212 99 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 RNU6-661P-201ENST00000362409 107 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 SNORA16B-201ENST00000364674 135 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 RNU4-16P-201ENST00000364737 141 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 MTATP8P2-201ENST00000435212 202 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 MIR1273D-201ENST00000577266 86 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 AC062037.1-201ENST00000605302 128 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 AL442128.1-201ENST00000615151 90 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 AC091932.4-201ENST00000623386 200 ntBASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS4Q8IUM7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 SNX2P2-201ENST00000424553 323 ntBASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 AC015922.2-201ENST00000435593 184 ntBASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 AC087499.4-201ENST00000448505 178 ntBASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 AC099513.1-201ENST00000490423 301 ntBASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 RNU6-904P-201ENST00000516206 101 ntBASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 MIR4713-201ENST00000582691 75 ntBASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 MIR1291-201ENST00000627649 87 ntBASIC2.63□□□□□ -1.99
NPAS4Q8IUM7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NPAS4Q8IUM7 MIR136-201ENST00000385207 82 ntBASIC2.62□□□□□ -1.99
NPAS4Q8IUM7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.62□□□□□ -1.99
NPAS4Q8IUM7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.62□□□□□ -1.99
NPAS4Q8IUM7 MIR4524B-201ENST00000581569 115 ntBASIC2.62□□□□□ -1.99
NPAS4Q8IUM7 Y_RNA.818-201ENST00000618813 71 ntBASIC2.62□□□□□ -1.99
NPAS4Q8IUM7 Y_RNA.78-201ENST00000362970 110 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 Y_RNA.220-201ENST00000364244 109 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 MIR1267-201ENST00000408723 78 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 RPS3AP1-201ENST00000413190 320 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 RPL39P25-201ENST00000449384 154 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 RNU7-80P-201ENST00000459562 61 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 RNU7-6P-201ENST00000516845 62 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 MIR3163-201ENST00000581592 73 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 AC046143.2-201ENST00000609789 160 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 MIR6895-201ENST00000613497 78 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 AL162726.3-218ENST00000636401 95 ntBASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NPAS4Q8IUM7 RNA5SP173-201ENST00000364857 136 ntBASIC2.6□□□□□ -1.99
NPAS4Q8IUM7 SNORD88.1-201ENST00000408684 91 ntBASIC2.6□□□□□ -1.99
NPAS4Q8IUM7 JTBP1-201ENST00000441314 247 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms