Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNORD115-9-201ENST00000362912 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-21-201ENST00000362963 81 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-14-201ENST00000363090 81 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-41-201ENST00000363608 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-11-201ENST00000363616 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-5-201ENST00000363633 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-39-201ENST00000363694 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-4-201ENST00000363810 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-6-201ENST00000363942 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-42-201ENST00000364273 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-15-201ENST00000364809 81 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-26-201ENST00000365067 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-10-201ENST00000365073 81 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-43-201ENST00000365503 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORD115-36-201ENST00000365629 82 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 U8.9-201ENST00000365667 134 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.426-201ENST00000384068 113 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 U8.16-201ENST00000391279 133 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SNORA7.5-201ENST00000410672 110 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.620-201ENST00000411009 88 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 RNU7-96P-201ENST00000459535 64 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 AC139453.2-201ENST00000487255 133 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 RNU6-998P-201ENST00000515894 101 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 AC090821.2-201ENST00000523552 176 ntBASIC3.15□□□□□ -1.91
RNF135Q8IUD6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RNF135Q8IUD6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RNF135Q8IUD6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.15□□□□□ -1.91
RNF135Q8IUD6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RNF135Q8IUD6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF135Q8IUD6 RNU6-833P-201ENST00000363486 107 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.377-201ENST00000365644 108 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.467-201ENST00000384297 102 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 MIR196B-201ENST00000384852 84 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 snoU13.26-201ENST00000459452 105 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.659-201ENST00000515994 113 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 SNORA31.4-201ENST00000516049 129 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 MIR4668-201ENST00000582284 70 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 MIR4662A-201ENST00000637499 67 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNF135Q8IUD6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
RNF135Q8IUD6 AC007336.1-201ENST00000576365 3828 ntBASIC3.14□□□□□ -1.91
RNF135Q8IUD6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF135Q8IUD6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF135Q8IUD6 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.13□□□□□ -1.91
RNF135Q8IUD6 RNU6-776P-201ENST00000364403 104 ntBASIC3.13□□□□□ -1.91
RNF135Q8IUD6 RNU6-1022P-201ENST00000365049 104 ntBASIC3.13□□□□□ -1.91
RNF135Q8IUD6 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
RNF135Q8IUD6 RPL23AP63-201ENST00000498752 471 ntBASIC3.13□□□□□ -1.91
RNF135Q8IUD6 AC008413.1-201ENST00000511864 177 ntBASIC3.13□□□□□ -1.91
RNF135Q8IUD6 RNA5SP168-201ENST00000516642 112 ntBASIC3.13□□□□□ -1.91
RNF135Q8IUD6 IGLV3-17-201ENST00000519099 244 ntBASIC3.13□□□□□ -1.91
RNF135Q8IUD6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.13□□□□□ -1.91
RNF135Q8IUD6 AC021613.1-201ENST00000623880 111 ntBASIC3.13□□□□□ -1.91
RNF135Q8IUD6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF135Q8IUD6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF135Q8IUD6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.299-201ENST00000364973 94 ntBASIC3.12□□□□□ -1.91
RNF135Q8IUD6 RNU6-1201P-201ENST00000384227 107 ntBASIC3.12□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.494-201ENST00000384432 111 ntBASIC3.12□□□□□ -1.91
RNF135Q8IUD6 MIR1267-201ENST00000408723 78 ntBASIC3.12□□□□□ -1.91
RNF135Q8IUD6 RNU7-181P-201ENST00000517234 74 ntBASIC3.12□□□□□ -1.91
RNF135Q8IUD6 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
RNF135Q8IUD6 AC079600.2-201ENST00000550076 130 ntBASIC3.12□□□□□ -1.91
RNF135Q8IUD6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF135Q8IUD6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNF135Q8IUD6 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF135Q8IUD6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RNF135Q8IUD6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF135Q8IUD6 MIR1283-2-201ENST00000408621 87 ntBASIC3.11□□□□□ -1.91
RNF135Q8IUD6 RNU4-69P-201ENST00000410677 143 ntBASIC3.11□□□□□ -1.91
RNF135Q8IUD6 POLR2J4-204ENST00000418424 324 ntBASIC3.11□□□□□ -1.91
RNF135Q8IUD6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.11□□□□□ -1.91
RNF135Q8IUD6 SNORD109B-201ENST00000458961 67 ntBASIC3.11□□□□□ -1.91
RNF135Q8IUD6 SNORD109A-201ENST00000459128 67 ntBASIC3.11□□□□□ -1.91
RNF135Q8IUD6 RNU7-12P-201ENST00000516030 62 ntBASIC3.11□□□□□ -1.91
RNF135Q8IUD6 ZNF861P-201ENST00000588126 639 ntBASIC3.11□□□□□ -1.91
RNF135Q8IUD6 AC006160.2-201ENST00000637708 154 ntBASIC3.11□□□□□ -1.91
RNF135Q8IUD6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.1□□□□□ -1.91
RNF135Q8IUD6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RNF135Q8IUD6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF135Q8IUD6 RNU6-851P-201ENST00000384565 107 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 RNY1P4-201ENST00000384595 115 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 RNU6-1031P-201ENST00000384773 107 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 RNA5SP465-201ENST00000391195 109 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.611-201ENST00000410682 108 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 RNU2-7P-201ENST00000410794 178 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 RNU2-40P-201ENST00000410833 196 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 RNU6-1018P-201ENST00000516577 106 ntBASIC3.1□□□□□ -1.91
RNF135Q8IUD6 AC131280.1-202ENST00000624067 4211 ntBASIC3.09□□□□□ -1.91
RNF135Q8IUD6 Y_RNA.4-201ENST00000362333 112 ntBASIC3.09□□□□□ -1.91
RNF135Q8IUD6 HMGN2P3-201ENST00000433603 273 ntBASIC3.09□□□□□ -1.91
RNF135Q8IUD6 HMGN2P5-201ENST00000436882 273 ntBASIC3.09□□□□□ -1.91
RNF135Q8IUD6 AL513328.1-201ENST00000446460 224 ntBASIC3.09□□□□□ -1.91
RNF135Q8IUD6 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
RNF135Q8IUD6 RNVU1-2-201ENST00000516326 135 ntBASIC3.09□□□□□ -1.91
RNF135Q8IUD6 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
RNF135Q8IUD6 AC092881.1-201ENST00000638218 2733 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms