Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU7-28P-201ENST00000516759 62 ntBASIC2.52□□□□□ -2.01
ATG4DQ86TL0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.52□□□□□ -2.01
ATG4DQ86TL0 MIR4439-201ENST00000583746 80 ntBASIC2.52□□□□□ -2.01
ATG4DQ86TL0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
ATG4DQ86TL0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.52□□□□□ -2.01
ATG4DQ86TL0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ATG4DQ86TL0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ATG4DQ86TL0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
ATG4DQ86TL0 RNU6-633P-201ENST00000362612 103 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 SNORD115-27-201ENST00000364430 82 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 MIR887-201ENST00000401258 79 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 MIR1262-201ENST00000408276 93 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 RNU6-1190P-201ENST00000410811 104 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 RNA5SP344-201ENST00000411081 104 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 AC105272.1-201ENST00000438604 198 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 RN7SL499P-201ENST00000481141 276 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 RNU6-958P-201ENST00000516995 106 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.51□□□□□ -2.01
ATG4DQ86TL0 MIR4672-201ENST00000583126 81 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
ATG4DQ86TL0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ATG4DQ86TL0 AC009487.2-201ENST00000420969 6821 ntBASIC2.51□□□□□ -2.01
ATG4DQ86TL0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.5□□□□□ -2.01
ATG4DQ86TL0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
ATG4DQ86TL0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ATG4DQ86TL0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 RNU6-1163P-201ENST00000364516 107 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 RNU6-424P-201ENST00000384367 105 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 RNU6-160P-201ENST00000384591 107 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 MIR4319-201ENST00000577285 85 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 AC006023.1-201ENST00000603944 259 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 SEPT14P17-201ENST00000617978 177 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 MIR6841-201ENST00000637129 72 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATG4DQ86TL0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.5□□□□□ -2.01
ATG4DQ86TL0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ATG4DQ86TL0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.49□□□□□ -2.01
ATG4DQ86TL0 SNORA68.1-201ENST00000364537 132 ntBASIC2.49□□□□□ -2.01
ATG4DQ86TL0 SNORA25B-201ENST00000365507 128 ntBASIC2.49□□□□□ -2.01
ATG4DQ86TL0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.49□□□□□ -2.01
ATG4DQ86TL0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.49□□□□□ -2.01
ATG4DQ86TL0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.49□□□□□ -2.01
ATG4DQ86TL0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.49□□□□□ -2.01
ATG4DQ86TL0 MIR3152-201ENST00000579801 74 ntBASIC2.49□□□□□ -2.01
ATG4DQ86TL0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.49□□□□□ -2.01
ATG4DQ86TL0 MIR8054-201ENST00000620877 86 ntBASIC2.49□□□□□ -2.01
ATG4DQ86TL0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
ATG4DQ86TL0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ATG4DQ86TL0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.49□□□□□ -2.01
ATG4DQ86TL0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.48□□□□□ -2.01
ATG4DQ86TL0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ATG4DQ86TL0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATG4DQ86TL0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.48□□□□□ -2.01
ATG4DQ86TL0 RNA5SP493-201ENST00000364115 91 ntBASIC2.48□□□□□ -2.01
ATG4DQ86TL0 Y_RNA.565-201ENST00000384719 101 ntBASIC2.48□□□□□ -2.01
ATG4DQ86TL0 RNU6-1307P-201ENST00000391012 103 ntBASIC2.48□□□□□ -2.01
ATG4DQ86TL0 SNORA26.6-201ENST00000391256 115 ntBASIC2.48□□□□□ -2.01
ATG4DQ86TL0 AL138827.1-201ENST00000402666 306 ntBASIC2.48□□□□□ -2.01
ATG4DQ86TL0 RNU7-67P-201ENST00000459003 62 ntBASIC2.48□□□□□ -2.01
ATG4DQ86TL0 RNU6-1006P-201ENST00000516998 103 ntBASIC2.48□□□□□ -2.01
ATG4DQ86TL0 MIR4791-201ENST00000607666 84 ntBASIC2.48□□□□□ -2.01
ATG4DQ86TL0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
ATG4DQ86TL0 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 AL442644.1-201ENST00000454390 3105 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 RNU1-112P-201ENST00000364401 164 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 RNU6-524P-201ENST00000384270 107 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 MIR516B2-201ENST00000385190 85 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 AC087499.2-201ENST00000432861 149 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4DQ86TL0 SNORA31.10-201ENST00000516482 106 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.47□□□□□ -2.01
ATG4DQ86TL0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.47□□□□□ -2.01
ATG4DQ86TL0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ATG4DQ86TL0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATG4DQ86TL0 RNA5SP139-201ENST00000364340 117 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 Y_RNA.370-201ENST00000365589 108 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 RNU6-220P-201ENST00000390919 107 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 U8.16-201ENST00000391279 133 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 RNA5SP21-201ENST00000410917 96 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 SEM1P1-201ENST00000506694 209 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 RNU7-2P-201ENST00000516096 62 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 MIR4712-201ENST00000583750 82 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 RPL12P50-201ENST00000603116 116 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.46□□□□□ -2.02
ATG4DQ86TL0 MIR6717-201ENST00000622747 73 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 AC027279.3-201ENST00000625055 122 ntBASIC2.46□□□□□ -2.02
ATG4DQ86TL0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATG4DQ86TL0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.45□□□□□ -2.02
ATG4DQ86TL0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4DQ86TL0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4DQ86TL0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ATG4DQ86TL0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ATG4DQ86TL0 AC062016.1-201ENST00000355719 319 ntBASIC2.45□□□□□ -2.02
ATG4DQ86TL0 RNU6-913P-201ENST00000390913 95 ntBASIC2.45□□□□□ -2.02
ATG4DQ86TL0 Z96811.1-201ENST00000445880 108 ntBASIC2.45□□□□□ -2.02
ATG4DQ86TL0 MIR3169-201ENST00000578032 83 ntBASIC2.45□□□□□ -2.02
ATG4DQ86TL0 AC022513.1-201ENST00000624512 117 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms