Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.97□□□□□ -2.09
UBE3BQ7Z3V4 SNORD53B-201ENST00000577887 78 ntBASIC1.97□□□□□ -2.09
UBE3BQ7Z3V4 AC134878.1-201ENST00000619901 243 ntBASIC1.97□□□□□ -2.09
UBE3BQ7Z3V4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 MIR424-201ENST00000362227 98 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 RNU6-60P-201ENST00000364792 103 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 SNORA20-201ENST00000384662 132 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 RNU6-959P-201ENST00000384671 107 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 AP1B1P2-201ENST00000416196 106 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 AF228730.3-201ENST00000436691 102 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 PGBD4P5-201ENST00000445958 426 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 RNU7-12P-201ENST00000516030 62 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 MIR4498-201ENST00000577599 66 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 BX248123.2-201ENST00000606318 124 ntBASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
UBE3BQ7Z3V4 SNORD115-28-201ENST00000363931 81 ntBASIC1.95□□□□□ -2.1
UBE3BQ7Z3V4 SNORD38C-201ENST00000384381 69 ntBASIC1.95□□□□□ -2.1
UBE3BQ7Z3V4 AC015922.2-201ENST00000435593 184 ntBASIC1.95□□□□□ -2.1
UBE3BQ7Z3V4 AP001328.1-201ENST00000528550 176 ntBASIC1.95□□□□□ -2.1
UBE3BQ7Z3V4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.95□□□□□ -2.1
UBE3BQ7Z3V4 TUG1_4.1-201ENST00000619464 181 ntBASIC1.95□□□□□ -2.1
UBE3BQ7Z3V4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.94□□□□□ -2.1
UBE3BQ7Z3V4 MIR194-1-201ENST00000384892 85 ntBASIC1.94□□□□□ -2.1
UBE3BQ7Z3V4 RNU7-95P-201ENST00000459222 64 ntBASIC1.94□□□□□ -2.1
UBE3BQ7Z3V4 RNU4-57P-201ENST00000515980 135 ntBASIC1.94□□□□□ -2.1
UBE3BQ7Z3V4 RNU2-60P-201ENST00000517290 128 ntBASIC1.94□□□□□ -2.1
UBE3BQ7Z3V4 snoU13.31-201ENST00000607291 104 ntBASIC1.94□□□□□ -2.1
UBE3BQ7Z3V4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 RNU6-915P-201ENST00000364943 103 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 MIR452-201ENST00000385020 85 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 AL606753.1-201ENST00000427435 87 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 AC087499.4-201ENST00000448505 178 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 MIR5197-201ENST00000583721 112 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 U7.2-201ENST00000607576 63 ntBASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.93□□□□□ -2.1
UBE3BQ7Z3V4 U8.1-201ENST00000362843 134 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 MIR539-201ENST00000365690 78 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 SNORA67.6-201ENST00000391093 99 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 AL603914.1-201ENST00000401964 204 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 MIR548I2-201ENST00000408348 149 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 RNU6-938P-201ENST00000411285 103 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 AC108729.3-201ENST00000513484 108 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 SCARNA15-202ENST00000516881 127 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 AC015726.2-201ENST00000620112 122 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 SNORD3E-202ENST00000627253 216 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 MIR376A2-201ENST00000636782 80 ntBASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
UBE3BQ7Z3V4 RNU6-1189P-201ENST00000383958 107 ntBASIC1.91□□□□□ -2.1
UBE3BQ7Z3V4 RNU6-203P-201ENST00000384038 104 ntBASIC1.91□□□□□ -2.1
UBE3BQ7Z3V4 RNU6-1117P-201ENST00000384525 104 ntBASIC1.91□□□□□ -2.1
UBE3BQ7Z3V4 RNA5SP236-201ENST00000516169 116 ntBASIC1.91□□□□□ -2.1
UBE3BQ7Z3V4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.91□□□□□ -2.1
UBE3BQ7Z3V4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.91□□□□□ -2.1
UBE3BQ7Z3V4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.91□□□□□ -2.1
UBE3BQ7Z3V4 AL512598.1-201ENST00000610158 273 ntBASIC1.91□□□□□ -2.1
UBE3BQ7Z3V4 MIR517C-201ENST00000385103 95 ntBASIC1.9□□□□□ -2.11
UBE3BQ7Z3V4 AC093850.1-201ENST00000454121 251 ntBASIC1.9□□□□□ -2.11
UBE3BQ7Z3V4 RNU6-971P-201ENST00000516920 106 ntBASIC1.9□□□□□ -2.11
UBE3BQ7Z3V4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 MIR526A1-201ENST00000384897 85 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 AC004965.1-201ENST00000413033 213 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 SNORD36C-201ENST00000516733 66 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 AP003484.1-201ENST00000530974 250 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 MIR4778-201ENST00000577635 80 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 MIR3121-201ENST00000579680 77 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 MTND5P32-201ENST00000560711 1802 ntBASIC1.89□□□□□ -2.11
UBE3BQ7Z3V4 SNORD18B-201ENST00000365659 72 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 RNU6-22P-201ENST00000384355 107 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 MIR136-201ENST00000385207 82 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 MTATP6P21-201ENST00000440681 189 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 RNU6-1149P-201ENST00000516810 97 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 AC011603.4-201ENST00000611325 277 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 AC095038.3-201ENST00000634439 195 ntBASIC1.88□□□□□ -2.11
UBE3BQ7Z3V4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 Y_RNA.218-201ENST00000364218 104 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 RNU6-80P-201ENST00000384195 107 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 AL354695.1-201ENST00000427935 228 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 RNU6-479P-201ENST00000516348 105 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 SNORA31.24-201ENST00000517232 57 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 Y_RNA.757-201ENST00000578934 114 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.87□□□□□ -2.11
UBE3BQ7Z3V4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 240.6 ms