Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNA5SP168-201ENST00000516642 112 ntBASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 AL020996.3-201ENST00000606617 222 ntBASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 AC007318.2-201ENST00000620999 243 ntBASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 AC006386.2-201ENST00000624491 75 ntBASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 AC012005.1-201ENST00000624575 75 ntBASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LYSMD3Q7Z3D4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 RNU6-1307P-201ENST00000391012 103 ntBASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 AL445685.2-201ENST00000422551 342 ntBASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 RNU7-12P-201ENST00000516030 62 ntBASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 AL355596.1-201ENST00000565399 3996 ntBASIC3.01□□□□□ -1.93
LYSMD3Q7Z3D4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 SNORD115-27-201ENST00000364430 82 ntBASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 SNORD21-201ENST00000383953 95 ntBASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 RNA5SP274-201ENST00000410484 108 ntBASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 AC006483.1-201ENST00000487308 313 ntBASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 RNU6-826P-201ENST00000516827 104 ntBASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 MIR6852-201ENST00000621699 66 ntBASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3□□□□□ -1.93
LYSMD3Q7Z3D4 AC005336.3-201ENST00000623833 2679 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 AL365361.1-201ENST00000566942 3481 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 SNORA80A-201ENST00000363922 136 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 MIR34C-201ENST00000384831 77 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 MIR206-201ENST00000384872 86 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 AL034345.1-201ENST00000407768 123 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 RNU7-73P-201ENST00000458743 63 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 AC069114.2-201ENST00000604699 304 ntBASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LYSMD3Q7Z3D4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 SNORD115-3-201ENST00000363100 82 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 RNU6-1244P-201ENST00000363614 108 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 SNORA44-201ENST00000384584 132 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 MIR452-201ENST00000385020 85 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 MIR136-201ENST00000385207 82 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 RPS29P28-201ENST00000446439 141 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 RN7SL633P-201ENST00000488974 297 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 MIR4712-201ENST00000583750 82 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 AC005786.1-201ENST00000588553 154 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 MIR7106-201ENST00000612419 65 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 AC243994.1-201ENST00000618627 109 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LYSMD3Q7Z3D4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 RNU6-461P-201ENST00000364195 107 ntBASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 RNU6-524P-201ENST00000384270 107 ntBASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 RNU6-342P-201ENST00000384521 104 ntBASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 SNORD28B-201ENST00000390993 75 ntBASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 AC022018.1-201ENST00000430685 241 ntBASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 UBE2DNL-203ENST00000474922 222 ntBASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 MIR548AR-201ENST00000582191 57 ntBASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 SNORD3E-202ENST00000627253 216 ntBASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LYSMD3Q7Z3D4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6-457P-201ENST00000363999 107 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 Y_RNA.567-201ENST00000384736 106 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 MIR1289-1-201ENST00000408836 144 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 HMGN1P33-201ENST00000432945 451 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 AL161932.1-201ENST00000437408 146 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 AP004217.1-201ENST00000480579 346 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 RN7SL499P-201ENST00000481141 276 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 U4atac.1-201ENST00000618345 95 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 AL137790.1-201ENST00000634283 177 ntBASIC2.96□□□□□ -1.94
LYSMD3Q7Z3D4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
LYSMD3Q7Z3D4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LYSMD3Q7Z3D4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.95□□□□□ -1.94
LYSMD3Q7Z3D4 AC093850.1-201ENST00000454121 251 ntBASIC2.95□□□□□ -1.94
LYSMD3Q7Z3D4 MIR3616-201ENST00000584070 92 ntBASIC2.95□□□□□ -1.94
LYSMD3Q7Z3D4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 MIR548G-201ENST00000408442 89 ntBASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6-613P-201ENST00000410412 108 ntBASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 RPL31P63-201ENST00000422565 375 ntBASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 AC245047.7-201ENST00000440265 293 ntBASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 RNU1-98P-201ENST00000458992 160 ntBASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 RNU7-35P-201ENST00000517174 62 ntBASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 MIR5094-201ENST00000578766 85 ntBASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 MIR4298-201ENST00000584380 73 ntBASIC2.94□□□□□ -1.94
LYSMD3Q7Z3D4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms