Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-1201P-201ENST00000384227 107 ntBASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 SNORA40.5-201ENST00000391061 128 ntBASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 CHEK2P4-201ENST00000450340 246 ntBASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 MTND1P11-201ENST00000456661 876 ntBASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 MIR5696-201ENST00000578474 85 ntBASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 MIR5188-201ENST00000583467 113 ntBASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 MIR6129-201ENST00000616087 109 ntBASIC-2.05□□□□□ -2.74
CCDC58Q4VC31 RNU6-1323P-201ENST00000384025 107 ntBASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.572-201ENST00000384757 98 ntBASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 SNORA49-201ENST00000386157 136 ntBASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 MIR548I3-201ENST00000408378 149 ntBASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 RPL30P15-201ENST00000457129 321 ntBASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 SNORA40.17-201ENST00000517256 115 ntBASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 AC124312.5-201ENST00000604451 268 ntBASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 AC069503.3-201ENST00000618674 145 ntBASIC-2.06□□□□□ -2.74
CCDC58Q4VC31 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.136-201ENST00000363444 102 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 MIR548O-201ENST00000408583 114 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 AL353813.1-201ENST00000440700 253 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 PCMTD1P1-201ENST00000455560 355 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 RNA5SP180-201ENST00000516181 101 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 RNU7-116P-201ENST00000516940 62 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 AC141846.1-201ENST00000568348 142 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 YWHAEP2-201ENST00000580066 112 ntBASIC-2.07□□□□□ -2.74
CCDC58Q4VC31 SNORD115-25-201ENST00000362619 82 ntBASIC-2.08□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.08□□□□□ -2.74
CCDC58Q4VC31 AC073415.1-201ENST00000449240 153 ntBASIC-2.08□□□□□ -2.74
CCDC58Q4VC31 HAR1A.1-201ENST00000459583 118 ntBASIC-2.08□□□□□ -2.74
CCDC58Q4VC31 AL158211.2-201ENST00000607282 395 ntBASIC-2.08□□□□□ -2.74
CCDC58Q4VC31 AC008536.2-201ENST00000607284 349 ntBASIC-2.08□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.57-201ENST00000362806 113 ntBASIC-2.09□□□□□ -2.74
CCDC58Q4VC31 RNY1P16-201ENST00000363063 111 ntBASIC-2.09□□□□□ -2.74
CCDC58Q4VC31 SNORA27-201ENST00000384323 126 ntBASIC-2.09□□□□□ -2.74
CCDC58Q4VC31 RNU4-55P-201ENST00000410731 137 ntBASIC-2.09□□□□□ -2.74
CCDC58Q4VC31 AC084290.1-201ENST00000434995 374 ntBASIC-2.09□□□□□ -2.74
CCDC58Q4VC31 ACA59.1-201ENST00000515966 143 ntBASIC-2.09□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.706-201ENST00000516933 99 ntBASIC-2.09□□□□□ -2.74
CCDC58Q4VC31 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-2.09□□□□□ -2.74
CCDC58Q4VC31 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 SNORD114-17-201ENST00000364699 75 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.410-201ENST00000383992 113 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 RNU6-949P-201ENST00000384040 107 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 RNU6-601P-201ENST00000384540 107 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 MTND1P27-201ENST00000451117 902 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 SNORA40.9-201ENST00000515895 93 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 AL442663.2-201ENST00000554385 511 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 AP000240.1-201ENST00000609910 452 ntBASIC-2.1□□□□□ -2.75
CCDC58Q4VC31 MIR20A-201ENST00000362279 71 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.106-201ENST00000363189 100 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 RNU6-181P-201ENST00000363225 107 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 RNU6-996P-201ENST00000365438 107 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.453-201ENST00000384223 109 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.457-201ENST00000384237 111 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 MIR889-201ENST00000401280 79 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 SNORD18.2-201ENST00000459604 70 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 RNU6-531P-201ENST00000516694 104 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 RNU6-445P-201ENST00000516949 107 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 MIR3920-201ENST00000581751 86 ntBASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.11□□□□□ -2.75
CCDC58Q4VC31 RNU6-1120P-201ENST00000362988 108 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.178-201ENST00000363832 102 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.220-201ENST00000364244 109 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 MIR527-201ENST00000385244 85 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 SNORD77.3-201ENST00000391113 65 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 AC098614.3-201ENST00000438957 440 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 RNU7-63P-201ENST00000459054 62 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 MIR4520-1-201ENST00000582609 70 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 AC245884.10-201ENST00000597355 337 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 PART1_1.1-201ENST00000611761 217 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 U4.1-201ENST00000620349 87 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 MIR1246-201ENST00000636535 73 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 AC112487.2-201ENST00000637950 304 ntBASIC-2.12□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.37-201ENST00000362606 108 ntBASIC-2.13□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.56-201ENST00000362798 112 ntBASIC-2.13□□□□□ -2.75
CCDC58Q4VC31 RNU6-653P-201ENST00000363074 106 ntBASIC-2.13□□□□□ -2.75
CCDC58Q4VC31 RNU4-58P-201ENST00000363192 141 ntBASIC-2.13□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.221-201ENST00000364248 96 ntBASIC-2.13□□□□□ -2.75
CCDC58Q4VC31 RNU6-1000P-201ENST00000391066 106 ntBASIC-2.13□□□□□ -2.75
CCDC58Q4VC31 RNU6-1038P-201ENST00000516516 104 ntBASIC-2.13□□□□□ -2.75
CCDC58Q4VC31 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-2.13□□□□□ -2.75
CCDC58Q4VC31 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.14□□□□□ -2.75
CCDC58Q4VC31 RNU6-476P-201ENST00000384726 107 ntBASIC-2.14□□□□□ -2.75
CCDC58Q4VC31 RNU6-588P-201ENST00000410281 105 ntBASIC-2.14□□□□□ -2.75
CCDC58Q4VC31 AC107027.2-201ENST00000512197 115 ntBASIC-2.14□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.757-201ENST00000578934 114 ntBASIC-2.14□□□□□ -2.75
CCDC58Q4VC31 MIR2681-201ENST00000581814 105 ntBASIC-2.14□□□□□ -2.75
CCDC58Q4VC31 AP001506.1-201ENST00000615444 211 ntBASIC-2.14□□□□□ -2.75
CCDC58Q4VC31 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.15□□□□□ -2.75
CCDC58Q4VC31 RNU6-597P-201ENST00000365620 102 ntBASIC-2.15□□□□□ -2.75
CCDC58Q4VC31 AC093423.1-201ENST00000440817 142 ntBASIC-2.15□□□□□ -2.75
CCDC58Q4VC31 AL118558.2-201ENST00000556294 238 ntBASIC-2.15□□□□□ -2.75
CCDC58Q4VC31 AC092954.2-201ENST00000609103 430 ntBASIC-2.15□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms