Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 Y_RNA.52-201ENST00000362760 96 ntBASIC2□□□□□ -2.09
SF3B3Q15393 RNU6-268P-201ENST00000364174 107 ntBASIC2□□□□□ -2.09
SF3B3Q15393 Y_RNA.261-201ENST00000364631 102 ntBASIC2□□□□□ -2.09
SF3B3Q15393 RNU6-1333P-201ENST00000516162 93 ntBASIC2□□□□□ -2.09
SF3B3Q15393 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2□□□□□ -2.09
SF3B3Q15393 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2□□□□□ -2.09
SF3B3Q15393 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2□□□□□ -2.09
SF3B3Q15393 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2□□□□□ -2.09
SF3B3Q15393 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SF3B3Q15393 RNU6-112P-201ENST00000363599 104 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 RNA5SP205-201ENST00000364653 136 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 Y_RNA.280-201ENST00000364765 112 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 Y_RNA.336-201ENST00000365307 109 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 SNORA4.2-201ENST00000365313 147 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 SNORD77.3-201ENST00000391113 65 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 RN7SKP200-201ENST00000410564 320 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 RN7SL274P-201ENST00000492268 272 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 RNU4-57P-201ENST00000515980 135 ntBASIC1.99□□□□□ -2.09
SF3B3Q15393 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SF3B3Q15393 RNU6-1290P-201ENST00000362957 109 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 RNU1-42P-201ENST00000364033 160 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 Y_RNA.294-201ENST00000364916 102 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 RNU6-296P-201ENST00000384608 107 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 MIR520A-201ENST00000384862 85 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 MIR802-201ENST00000390235 94 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 AL603914.1-201ENST00000401964 204 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 MIR548O-201ENST00000408583 114 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 RNU6-659P-201ENST00000516454 104 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 Y_RNA.692-201ENST00000516627 105 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 RNA5SP437-201ENST00000517249 129 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 MIR3121-201ENST00000579680 77 ntBASIC1.98□□□□□ -2.09
SF3B3Q15393 Y_RNA.226-201ENST00000364337 114 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 RNU6-950P-201ENST00000384651 107 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 RNU6-735P-201ENST00000410612 107 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.97□□□□□ -2.09
SF3B3Q15393 AF228730.3-201ENST00000436691 102 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 HMGN2P32-201ENST00000444648 269 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.97□□□□□ -2.09
SF3B3Q15393 CYCTP-201ENST00000504253 315 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 AC114811.1-201ENST00000507207 168 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 RNU7-25P-201ENST00000516544 62 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 RNU6-1116P-201ENST00000517269 99 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 SNORD53B-201ENST00000577887 78 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 Y_RNA.757-201ENST00000578934 114 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.97□□□□□ -2.09
SF3B3Q15393 AC027279.3-201ENST00000625055 122 ntBASIC1.97□□□□□ -2.09
SF3B3Q15393 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.96□□□□□ -2.1
SF3B3Q15393 SNORD18B-201ENST00000365659 72 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 RNU6-424P-201ENST00000384367 105 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 Y_RNA.547-201ENST00000384654 119 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 RNU6-1031P-201ENST00000384773 107 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 AL034345.1-201ENST00000407768 123 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.96□□□□□ -2.1
SF3B3Q15393 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.96□□□□□ -2.1
SF3B3Q15393 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.96□□□□□ -2.1
SF3B3Q15393 TRMT112P2-201ENST00000512910 132 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 RNA5SP236-201ENST00000516169 116 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 Y_RNA.690-201ENST00000516603 95 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.96□□□□□ -2.1
SF3B3Q15393 MIR376A2-201ENST00000636782 80 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 MTND5P32-201ENST00000560711 1802 ntBASIC1.96□□□□□ -2.1
SF3B3Q15393 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
SF3B3Q15393 RNU6-508P-201ENST00000363231 103 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 RNY1P10-201ENST00000363268 113 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 RNU6-309P-201ENST00000364573 106 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 U8.16-201ENST00000391279 133 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 CALM2P4-201ENST00000430810 426 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.95□□□□□ -2.1
SF3B3Q15393 RNU7-107P-201ENST00000459121 61 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.95□□□□□ -2.1
SF3B3Q15393 SCARNA15-202ENST00000516881 127 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
SF3B3Q15393 AC022254.1-201ENST00000567857 235 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 AC134878.1-201ENST00000619901 243 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 U1.36-201ENST00000620684 176 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 WWP1P1-201ENST00000466609 2769 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 AL442644.1-201ENST00000454390 3105 ntBASIC1.95□□□□□ -2.1
SF3B3Q15393 Y_RNA.114-201ENST00000363265 113 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 Y_RNA.410-201ENST00000383992 113 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 RNU6-163P-201ENST00000384396 106 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 MIR517C-201ENST00000385103 95 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 Y_RNA.629-201ENST00000411368 105 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 AL158147.1-201ENST00000443970 75 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 RNA5SP57-201ENST00000459463 123 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 RNA5SP168-201ENST00000516642 112 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 AC090049.2-201ENST00000550377 109 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 MIR5197-201ENST00000583721 112 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
SF3B3Q15393 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.94□□□□□ -2.1
SF3B3Q15393 Y_RNA.37-201ENST00000362606 108 ntBASIC1.93□□□□□ -2.1
SF3B3Q15393 RNU6-833P-201ENST00000363486 107 ntBASIC1.93□□□□□ -2.1
SF3B3Q15393 SNORD115-28-201ENST00000363931 81 ntBASIC1.93□□□□□ -2.1
SF3B3Q15393 Y_RNA.563-201ENST00000384707 108 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms