Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SNORD115-12-201ENST00000362583 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-29-201ENST00000362834 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-9-201ENST00000362912 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-21-201ENST00000362963 81 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-14-201ENST00000363090 81 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 Y_RNA.120-201ENST00000363304 110 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-13-201ENST00000363358 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-41-201ENST00000363608 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-11-201ENST00000363616 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-5-201ENST00000363633 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-39-201ENST00000363694 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-4-201ENST00000363810 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-16-201ENST00000363887 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-6-201ENST00000363942 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-42-201ENST00000364273 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 Y_RNA.241-201ENST00000364470 117 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-15-201ENST00000364809 81 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-1-201ENST00000364961 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-26-201ENST00000365067 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-10-201ENST00000365073 81 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-43-201ENST00000365503 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-36-201ENST00000365629 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORA40.5-201ENST00000391061 128 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 TMSB4XP3-201ENST00000445144 114 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 AC005908.1-201ENST00000468701 347 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 RNA5SP272-201ENST00000516095 111 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 MIR4419B-201ENST00000577260 68 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SNORD115-40-201ENST00000606510 82 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 AL353997.5-201ENST00000618886 171 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 MIR8063-201ENST00000621930 81 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSRP1Q08945 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
SSRP1Q08945 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SSRP1Q08945 Y_RNA.440-201ENST00000384120 114 ntBASIC2.09□□□□□ -2.07
SSRP1Q08945 MIR583-201ENST00000384846 75 ntBASIC2.09□□□□□ -2.07
SSRP1Q08945 AL451046.2-201ENST00000403074 277 ntBASIC2.09□□□□□ -2.07
SSRP1Q08945 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
SSRP1Q08945 SNORA74.3-201ENST00000517108 154 ntBASIC2.09□□□□□ -2.07
SSRP1Q08945 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
SSRP1Q08945 AP001340.1-201ENST00000624405 217 ntBASIC2.09□□□□□ -2.07
SSRP1Q08945 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SSRP1Q08945 MTND5P32-201ENST00000560711 1802 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 SNORD18B-201ENST00000365659 72 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 SNORA20-201ENST00000384662 132 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 MIR9-3-201ENST00000385084 90 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 SNORA40-201ENST00000388090 126 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 AL627390.1-201ENST00000396055 340 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 HSPE1P24-201ENST00000450782 238 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.08□□□□□ -2.08
SSRP1Q08945 RNU6-1149P-201ENST00000516810 97 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 AC090821.2-201ENST00000523552 176 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 AP001328.1-201ENST00000528550 176 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 AC091895.1-201ENST00000624494 256 ntBASIC2.08□□□□□ -2.08
SSRP1Q08945 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.08□□□□□ -2.08
SSRP1Q08945 RNU6-915P-201ENST00000364943 103 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 Y_RNA.370-201ENST00000365589 108 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 SNORA27-201ENST00000384323 126 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 AC107297.1-201ENST00000459991 176 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 RPS26P48-201ENST00000491713 339 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 SCARNA15-202ENST00000516881 127 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 MIR3910-1-201ENST00000580936 111 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 AL513534.2-201ENST00000603836 250 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 WWP1P1-201ENST00000466609 2769 ntBASIC2.07□□□□□ -2.08
SSRP1Q08945 MIR302D-201ENST00000362275 68 ntBASIC2.06□□□□□ -2.08
SSRP1Q08945 U8.1-201ENST00000362843 134 ntBASIC2.06□□□□□ -2.08
SSRP1Q08945 U8.13-201ENST00000390842 128 ntBASIC2.06□□□□□ -2.08
SSRP1Q08945 RNU6-257P-201ENST00000410238 98 ntBASIC2.06□□□□□ -2.08
SSRP1Q08945 MTATP6P21-201ENST00000440681 189 ntBASIC2.06□□□□□ -2.08
SSRP1Q08945 RNU7-43P-201ENST00000516554 64 ntBASIC2.06□□□□□ -2.08
SSRP1Q08945 RNU6-789P-201ENST00000517105 102 ntBASIC2.06□□□□□ -2.08
SSRP1Q08945 MIR548AR-201ENST00000582191 57 ntBASIC2.06□□□□□ -2.08
SSRP1Q08945 SNORD33-201ENST00000362761 85 ntBASIC2.05□□□□□ -2.08
SSRP1Q08945 SNORD28B-201ENST00000390993 75 ntBASIC2.05□□□□□ -2.08
SSRP1Q08945 MTND4LP9-201ENST00000427694 174 ntBASIC2.05□□□□□ -2.08
SSRP1Q08945 AC008834.1-201ENST00000511612 175 ntBASIC2.05□□□□□ -2.08
SSRP1Q08945 Y_RNA.686-201ENST00000516548 134 ntBASIC2.05□□□□□ -2.08
SSRP1Q08945 RNU6-922P-201ENST00000516753 99 ntBASIC2.05□□□□□ -2.08
SSRP1Q08945 RNU2-60P-201ENST00000517290 128 ntBASIC2.05□□□□□ -2.08
SSRP1Q08945 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.05□□□□□ -2.08
SSRP1Q08945 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
SSRP1Q08945 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.04□□□□□ -2.08
SSRP1Q08945 SNORD1A-201ENST00000364968 72 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 Y_RNA.586-201ENST00000391146 98 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 AL603914.1-201ENST00000401964 204 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 AC079140.2-201ENST00000506193 142 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 RNA5SP236-201ENST00000516169 116 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 RNA5SP458-201ENST00000516188 119 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 RNU7-70P-201ENST00000516941 66 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 RNU6-250P-201ENST00000516958 103 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 U7.2-201ENST00000607576 63 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 TUG1_4.1-201ENST00000619464 181 ntBASIC2.04□□□□□ -2.08
SSRP1Q08945 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SSRP1Q08945 SNORA70.7-201ENST00000384159 133 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 Y_RNA.494-201ENST00000384432 111 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 RNU6-1067P-201ENST00000384752 107 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 SNORD41-201ENST00000386967 70 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
SSRP1Q08945 RNU7-96P-201ENST00000459535 64 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms