Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU6-1122P-201ENST00000384449 107 ntBASIC-3.7□□□□□ -3
RPL39P62891 Y_RNA.525-201ENST00000384570 113 ntBASIC-3.7□□□□□ -3
RPL39P62891 MIR466-201ENST00000580653 84 ntBASIC-3.7□□□□□ -3
RPL39P62891 Y_RNA.241-201ENST00000364470 117 ntBASIC-3.71□□□□□ -3
RPL39P62891 MIR181A1-201ENST00000385026 110 ntBASIC-3.71□□□□□ -3
RPL39P62891 MIR548H3-201ENST00000408771 118 ntBASIC-3.71□□□□□ -3
RPL39P62891 RNA5SP54-201ENST00000516951 92 ntBASIC-3.71□□□□□ -3
RPL39P62891 AC021451.1-201ENST00000523498 1129 ntBASIC-3.71□□□□□ -3
RPL39P62891 AC080013.3-201ENST00000606839 578 ntBASIC-3.71□□□□□ -3
RPL39P62891 MIR6888-201ENST00000621977 67 ntBASIC-3.71□□□□□ -3
RPL39P62891 RNU6-777P-201ENST00000364265 104 ntBASIC-3.72□□□□□ -3
RPL39P62891 ELOCP17-201ENST00000414751 326 ntBASIC-3.72□□□□□ -3
RPL39P62891 BX295541.1-201ENST00000417774 250 ntBASIC-3.72□□□□□ -3
RPL39P62891 AL117351.1-201ENST00000438864 766 ntBASIC-3.72□□□□□ -3
RPL39P62891 AC090616.4-201ENST00000448026 115 ntBASIC-3.72□□□□□ -3
RPL39P62891 RNU6-653P-201ENST00000363074 106 ntBASIC-3.73□□□□□ -3.01
RPL39P62891 Y_RNA.436-201ENST00000384097 102 ntBASIC-3.73□□□□□ -3.01
RPL39P62891 Y_RNA.461-201ENST00000384263 103 ntBASIC-3.73□□□□□ -3.01
RPL39P62891 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-3.73□□□□□ -3.01
RPL39P62891 AC091144.1-201ENST00000519573 138 ntBASIC-3.73□□□□□ -3.01
RPL39P62891 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-3.73□□□□□ -3.01
RPL39P62891 AC124312.5-201ENST00000604451 268 ntBASIC-3.73□□□□□ -3.01
RPL39P62891 RN7SKP299-201ENST00000606679 301 ntBASIC-3.73□□□□□ -3.01
RPL39P62891 AC099654.12-201ENST00000639868 649 ntBASIC-3.73□□□□□ -3.01
RPL39P62891 RNU6-1260P-201ENST00000362944 107 ntBASIC-3.74□□□□□ -3.01
RPL39P62891 RNU6-1286P-201ENST00000383871 107 ntBASIC-3.74□□□□□ -3.01
RPL39P62891 RNU6-337P-201ENST00000391243 106 ntBASIC-3.74□□□□□ -3.01
RPL39P62891 RNU6-1203P-201ENST00000410703 110 ntBASIC-3.74□□□□□ -3.01
RPL39P62891 RNU4-88P-201ENST00000411220 86 ntBASIC-3.74□□□□□ -3.01
RPL39P62891 MIR4490-201ENST00000582647 84 ntBASIC-3.74□□□□□ -3.01
RPL39P62891 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-3.75□□□□□ -3.01
RPL39P62891 RNU7-140P-201ENST00000459546 60 ntBASIC-3.75□□□□□ -3.01
RPL39P62891 TRAJ51-201ENST00000504127 63 ntBASIC-3.75□□□□□ -3.01
RPL39P62891 RNU6-998P-201ENST00000515894 101 ntBASIC-3.75□□□□□ -3.01
RPL39P62891 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-3.75□□□□□ -3.01
RPL39P62891 AP001542.1-201ENST00000591314 200 ntBASIC-3.75□□□□□ -3.01
RPL39P62891 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-3.75□□□□□ -3.01
RPL39P62891 RNU6-1306P-201ENST00000365219 99 ntBASIC-3.76□□□□□ -3.01
RPL39P62891 RNU6-827P-201ENST00000365553 106 ntBASIC-3.76□□□□□ -3.01
RPL39P62891 RNU6-597P-201ENST00000365620 102 ntBASIC-3.76□□□□□ -3.01
RPL39P62891 Y_RNA.421-201ENST00000384052 101 ntBASIC-3.76□□□□□ -3.01
RPL39P62891 AP000542.1-201ENST00000448473 371 ntBASIC-3.76□□□□□ -3.01
RPL39P62891 MTCO3P39-201ENST00000514812 518 ntBASIC-3.76□□□□□ -3.01
RPL39P62891 RNU6-107P-201ENST00000516643 102 ntBASIC-3.76□□□□□ -3.01
RPL39P62891 AL008718.3-201ENST00000610217 321 ntBASIC-3.76□□□□□ -3.01
RPL39P62891 MIR548I3-201ENST00000408378 149 ntBASIC-3.77□□□□□ -3.01
RPL39P62891 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-3.77□□□□□ -3.01
RPL39P62891 AC107905.1-201ENST00000616204 426 ntBASIC-3.77□□□□□ -3.01
RPL39P62891 SNORD114-7-201ENST00000362520 77 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 RNU6-289P-201ENST00000364093 107 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 Y_RNA.302-201ENST00000364997 102 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 RNY1P13-201ENST00000365030 105 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 RNU6-54P-201ENST00000365563 107 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 RNU6-80P-201ENST00000384195 107 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 Y_RNA.482-201ENST00000384377 111 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 RNU6-21P-201ENST00000384710 107 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 RNU2-62P-201ENST00000410868 191 ntBASIC-3.78□□□□□ -3.01
RPL39P62891 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-3.78□□□□□ -3.01
RPL39P62891 SNORA72.3-201ENST00000365074 132 ntBASIC-3.79□□□□□ -3.02
RPL39P62891 MIR2113-201ENST00000459007 91 ntBASIC-3.79□□□□□ -3.02
RPL39P62891 Y_RNA.665-201ENST00000516177 98 ntBASIC-3.79□□□□□ -3.02
RPL39P62891 SNORA25.14-201ENST00000516481 132 ntBASIC-3.79□□□□□ -3.02
RPL39P62891 U6.109-201ENST00000636749 87 ntBASIC-3.79□□□□□ -3.02
RPL39P62891 RNY1P2-201ENST00000364820 117 ntBASIC-3.8□□□□□ -3.02
RPL39P62891 RNU6-891P-201ENST00000384280 111 ntBASIC-3.8□□□□□ -3.02
RPL39P62891 MIR3123-201ENST00000583417 75 ntBASIC-3.8□□□□□ -3.02
RPL39P62891 UBE2V2P2-201ENST00000587677 504 ntBASIC-3.8□□□□□ -3.02
RPL39P62891 AC005972.2-201ENST00000604690 348 ntBASIC-3.8□□□□□ -3.02
RPL39P62891 Y_RNA.91-201ENST00000363042 107 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 SNORD115-8-201ENST00000363856 82 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 RNU6-353P-201ENST00000364266 108 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 SNORD115-38-201ENST00000365037 82 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 RNU6-1264P-201ENST00000383891 107 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 SNORA51.5-201ENST00000384126 131 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-3.81□□□□□ -3.02
RPL39P62891 RNU6-150P-201ENST00000516237 95 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 MTND1P35-201ENST00000526739 508 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 MIR6717-201ENST00000622747 73 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 AL157770.1-201ENST00000623049 439 ntBASIC-3.81□□□□□ -3.02
RPL39P62891 SNORA40.5-201ENST00000391061 128 ntBASIC-3.82□□□□□ -3.02
RPL39P62891 SNORD77.3-201ENST00000391113 65 ntBASIC-3.82□□□□□ -3.02
RPL39P62891 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-3.82□□□□□ -3.02
RPL39P62891 AC023449.1-201ENST00000454464 154 ntBASIC-3.82□□□□□ -3.02
RPL39P62891 FGF7P4-201ENST00000509595 295 ntBASIC-3.82□□□□□ -3.02
RPL39P62891 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-3.82□□□□□ -3.02
RPL39P62891 MIR4748-201ENST00000578076 82 ntBASIC-3.82□□□□□ -3.02
RPL39P62891 AC132825.7-201ENST00000638744 335 ntBASIC-3.82□□□□□ -3.02
RPL39P62891 Y_RNA.257-201ENST00000364596 102 ntBASIC-3.83□□□□□ -3.02
RPL39P62891 RNY3P13-201ENST00000365542 102 ntBASIC-3.83□□□□□ -3.02
RPL39P62891 RNU6-549P-201ENST00000384433 107 ntBASIC-3.83□□□□□ -3.02
RPL39P62891 RNU6-429P-201ENST00000384582 108 ntBASIC-3.83□□□□□ -3.02
RPL39P62891 MIR519A1-201ENST00000385257 85 ntBASIC-3.83□□□□□ -3.02
RPL39P62891 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-3.83□□□□□ -3.02
RPL39P62891 AC091179.3-201ENST00000474761 144 ntBASIC-3.83□□□□□ -3.02
RPL39P62891 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-3.83□□□□□ -3.02
RPL39P62891 AC108081.1-201ENST00000604358 221 ntBASIC-3.83□□□□□ -3.02
RPL39P62891 AL391262.2-201ENST00000622466 494 ntBASIC-3.83□□□□□ -3.02
RPL39P62891 Y_RNA.353-201ENST00000365440 108 ntBASIC-3.84□□□□□ -3.02
RPL39P62891 SNORA26.6-201ENST00000391256 115 ntBASIC-3.84□□□□□ -3.02
RPL39P62891 MTND2P18-201ENST00000419962 1030 ntBASIC-3.84□□□□□ -3.02
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms