Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU7-96P-201ENST00000459535 64 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 RPS23P4-201ENST00000487908 423 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 RNU6-998P-201ENST00000515894 101 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 Y_RNA.685-201ENST00000516532 108 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 HSPE1P19-201ENST00000603327 295 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 SNORA28-201ENST00000606769 126 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 AC022513.1-201ENST00000624512 117 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.51□□□□□ -2.01
ERVFC1P60507 SNORD115-34-201ENST00000362441 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-12-201ENST00000362583 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-29-201ENST00000362834 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-9-201ENST00000362912 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-21-201ENST00000362963 81 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-14-201ENST00000363090 81 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-13-201ENST00000363358 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-41-201ENST00000363608 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-11-201ENST00000363616 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-5-201ENST00000363633 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-39-201ENST00000363694 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-4-201ENST00000363810 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-16-201ENST00000363887 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-6-201ENST00000363942 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 RNA5SP99-201ENST00000364020 114 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-42-201ENST00000364273 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-15-201ENST00000364809 81 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-1-201ENST00000364961 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-26-201ENST00000365067 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-10-201ENST00000365073 81 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-43-201ENST00000365503 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORD115-36-201ENST00000365629 82 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 RN7SKP200-201ENST00000410564 320 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 AC096949.1-201ENST00000412047 152 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 AC114811.1-201ENST00000507207 168 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 SNORA31.4-201ENST00000516049 129 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 AC026421.1-201ENST00000519101 163 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 MIR8054-201ENST00000620877 86 ntBASIC2.5□□□□□ -2.01
ERVFC1P60507 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ERVFC1P60507 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
ERVFC1P60507 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
ERVFC1P60507 Y_RNA.10-201ENST00000362371 110 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 RNU6-363P-201ENST00000362895 105 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 RNY3P2-201ENST00000362918 102 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 Y_RNA.507-201ENST00000384500 99 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 SNORA11.4-201ENST00000408823 129 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 RNU6-893P-201ENST00000458841 100 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 RNU6-638P-201ENST00000516582 104 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 MIR4694-201ENST00000578534 80 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 MIR3618-201ENST00000580330 88 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 AC005786.1-201ENST00000588553 154 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 MIR6873-201ENST00000622788 63 ntBASIC2.49□□□□□ -2.01
ERVFC1P60507 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.49□□□□□ -2.01
ERVFC1P60507 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
ERVFC1P60507 Y_RNA.299-201ENST00000364973 94 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 RNU1-52P-201ENST00000384190 164 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 Y_RNA.531-201ENST00000384589 121 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 RNA5SP109-201ENST00000391010 116 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 AL022718.1-201ENST00000412004 84 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 AL603825.1-201ENST00000438481 80 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 PGBD4P5-201ENST00000445958 426 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.48□□□□□ -2.01
ERVFC1P60507 AC113410.1-201ENST00000505029 247 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 AC004812.1-201ENST00000540773 146 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 AC021613.1-201ENST00000623880 111 ntBASIC2.48□□□□□ -2.01
ERVFC1P60507 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
ERVFC1P60507 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
ERVFC1P60507 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
ERVFC1P60507 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
ERVFC1P60507 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ERVFC1P60507 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ERVFC1P60507 RNU6-23P-201ENST00000363283 107 ntBASIC2.47□□□□□ -2.01
ERVFC1P60507 RNU6-1019P-201ENST00000364424 107 ntBASIC2.47□□□□□ -2.01
ERVFC1P60507 RNU4-16P-201ENST00000364737 141 ntBASIC2.47□□□□□ -2.01
ERVFC1P60507 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
ERVFC1P60507 RNU6-163P-201ENST00000384396 106 ntBASIC2.47□□□□□ -2.01
ERVFC1P60507 RNU6-482P-201ENST00000391068 107 ntBASIC2.47□□□□□ -2.01
ERVFC1P60507 FAM71BP1-201ENST00000604431 523 ntBASIC2.47□□□□□ -2.01
ERVFC1P60507 MIR1245B-201ENST00000636115 69 ntBASIC2.47□□□□□ -2.01
ERVFC1P60507 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.47□□□□□ -2.01
ERVFC1P60507 Z82195.2-201ENST00000612348 18351 ntBASIC2.46□□□□□ -2.01
ERVFC1P60507 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
ERVFC1P60507 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.46□□□□□ -2.02
ERVFC1P60507 RNU6-833P-201ENST00000363486 107 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 Y_RNA.241-201ENST00000364470 117 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 RNU6-424P-201ENST00000384367 105 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 POLR2J4-204ENST00000418424 324 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 AL512326.2-201ENST00000426359 151 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 AC015922.2-201ENST00000435593 184 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.46□□□□□ -2.02
ERVFC1P60507 STAG3L5P-204ENST00000443759 179 ntBASIC2.46□□□□□ -2.02
ERVFC1P60507 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.46□□□□□ -2.02
ERVFC1P60507 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms