Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MTND3P2-201ENST00000438452 342 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 RNU6-947P-201ENST00000516264 106 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 RNU7-25P-201ENST00000516544 62 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 AC006006.1-201ENST00000603082 144 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 FAM71BP1-201ENST00000604431 523 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 AL442067.1-201ENST00000613261 223 ntBASIC0.86□□□□□ -2.27
HMGCLP35914 SNORD115-34-201ENST00000362441 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-12-201ENST00000362583 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-29-201ENST00000362834 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-9-201ENST00000362912 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-21-201ENST00000362963 81 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-14-201ENST00000363090 81 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-13-201ENST00000363358 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-41-201ENST00000363608 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-11-201ENST00000363616 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-5-201ENST00000363633 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-39-201ENST00000363694 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-4-201ENST00000363810 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-16-201ENST00000363887 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-6-201ENST00000363942 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 RNY1-201ENST00000364228 113 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-42-201ENST00000364273 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-15-201ENST00000364809 81 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-1-201ENST00000364961 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-26-201ENST00000365067 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-10-201ENST00000365073 81 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORA1.2-201ENST00000365189 134 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-43-201ENST00000365503 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-36-201ENST00000365629 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 RNU6-1228P-201ENST00000391014 107 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 Y_RNA.590-201ENST00000410140 107 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 RNU4-43P-201ENST00000410628 137 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 POLR2J4-204ENST00000418424 324 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 AC087499.4-201ENST00000448505 178 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGCLP35914 SNRPGP8-201ENST00000454064 226 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 Y_RNA.666-201ENST00000516187 112 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 AL353621.2-201ENST00000605340 133 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD115-40-201ENST00000606510 82 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SEPT14P17-201ENST00000617978 177 ntBASIC0.85□□□□□ -2.27
HMGCLP35914 SNORD61-201ENST00000384252 73 ntBASIC0.84□□□□□ -2.27
HMGCLP35914 Y_RNA.478-201ENST00000384358 107 ntBASIC0.84□□□□□ -2.27
HMGCLP35914 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
HMGCLP35914 RNU7-181P-201ENST00000517234 74 ntBASIC0.84□□□□□ -2.27
HMGCLP35914 MIR4251-201ENST00000635819 61 ntBASIC0.84□□□□□ -2.27
HMGCLP35914 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
HMGCLP35914 Y_RNA.164-201ENST00000363709 102 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 Y_RNA.277-201ENST00000364754 102 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 Y_RNA.292-201ENST00000364904 97 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 MIR802-201ENST00000390235 94 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 RNU6-847P-201ENST00000411115 108 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 RNU7-90P-201ENST00000459216 62 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.83□□□□□ -2.28
HMGCLP35914 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 RNU6-453P-201ENST00000516819 85 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGCLP35914 MIR4503-201ENST00000582187 83 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 MIR4791-201ENST00000607666 84 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 AC062037.2-201ENST00000610137 73 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 MIR6504-201ENST00000613520 61 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 AC015726.2-201ENST00000620112 122 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 U4.1-201ENST00000620349 87 ntBASIC0.83□□□□□ -2.28
HMGCLP35914 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
HMGCLP35914 SNORD115-28-201ENST00000363931 81 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 Y_RNA.193-201ENST00000363979 102 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 Y_RNA.262-201ENST00000364641 102 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 Y_RNA.634-201ENST00000364811 113 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 Y_RNA.350-201ENST00000365409 98 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 Y_RNA.452-201ENST00000384202 108 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 Y_RNA.494-201ENST00000384432 111 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 MT-TT-201ENST00000387460 66 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 MIR1302-3-201ENST00000408128 138 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 RNU6-613P-201ENST00000410412 108 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGCLP35914 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 AL020996.3-201ENST00000606617 222 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 MTND1P7-201ENST00000632801 297 ntBASIC0.82□□□□□ -2.28
HMGCLP35914 MIR103A2-201ENST00000362154 78 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 Y_RNA.37-201ENST00000362606 108 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU6-103P-201ENST00000363686 107 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU6-580P-201ENST00000365159 107 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU4-17P-201ENST00000365598 141 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 SNORA40.5-201ENST00000391061 128 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 SNORA26-201ENST00000391286 122 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 AL606845.1-201ENST00000404881 255 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU6-1023P-201ENST00000516137 106 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU6-1299P-201ENST00000516316 100 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 Y_RNA.680-201ENST00000516441 93 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU6-504P-201ENST00000516568 104 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 RNU6-365P-201ENST00000517113 106 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 AC109810.1-201ENST00000534066 224 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 AP000942.4-201ENST00000604811 241 ntBASIC0.81□□□□□ -2.28
HMGCLP35914 MIR6516-201ENST00000630554 81 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms