Protein–RNA interactions for Protein: P35625

TIMP3, Metalloproteinase inhibitor 3, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3P35625 MIR548A2-201ENST00000384956 97 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 MIR660-201ENST00000385235 97 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 AC093850.1-201ENST00000454121 251 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 AC092991.1-201ENST00000477176 376 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 RNU7-25P-201ENST00000516544 62 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 AL365205.2-201ENST00000594586 68 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 AC091895.1-201ENST00000624494 256 ntBASIC1.41□□□□□ -2.18
TIMP3P35625 RNU6-414P-201ENST00000363705 104 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 RNA5SP363-201ENST00000365072 115 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 Y_RNA.547-201ENST00000384654 119 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 MIR518F-201ENST00000384973 87 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 Y_RNA.584-201ENST00000391090 114 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 RNA5SP127-201ENST00000411051 133 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.4□□□□□ -2.19
TIMP3P35625 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.4□□□□□ -2.19
TIMP3P35625 RNU7-197P-201ENST00000458836 62 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 RNU6-406P-201ENST00000516470 107 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 MIR4778-201ENST00000577635 80 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 AC015726.2-201ENST00000620112 122 ntBASIC1.4□□□□□ -2.19
TIMP3P35625 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.4□□□□□ -2.19
TIMP3P35625 WWP1P1-201ENST00000466609 2769 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 AC010332.2-201ENST00000613083 1904 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 RNY1P11-201ENST00000363759 113 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 Y_RNA.251-201ENST00000364551 99 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 RNU6-1292P-201ENST00000383856 107 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 RNU6-203P-201ENST00000384038 104 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 SNORA20-201ENST00000384662 132 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 MIR452-201ENST00000385020 85 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 MIR624-201ENST00000385217 97 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 RNU6-460P-201ENST00000391158 108 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 AF228730.3-201ENST00000436691 102 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 RNU7-95P-201ENST00000459222 64 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.39□□□□□ -2.19
TIMP3P35625 AC131055.1-201ENST00000584626 316 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 AC134878.1-201ENST00000619901 243 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 AC132825.6-201ENST00000638861 357 ntBASIC1.39□□□□□ -2.19
TIMP3P35625 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
TIMP3P35625 Y_RNA.4-201ENST00000362333 112 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 RNU6-1123P-201ENST00000362347 106 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 SNORD115-28-201ENST00000363931 81 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 Y_RNA.420-201ENST00000384043 110 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TIMP3P35625 SNORD77.3-201ENST00000391113 65 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 RNU6-257P-201ENST00000410238 98 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 AC004965.1-201ENST00000413033 213 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.38□□□□□ -2.19
TIMP3P35625 AC022254.1-201ENST00000567857 235 ntBASIC1.38□□□□□ -2.19
TIMP3P35625 Y_RNA.37-201ENST00000362606 108 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 Y_RNA.410-201ENST00000383992 113 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 RNU6-439P-201ENST00000384188 106 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 MIR516B2-201ENST00000385190 85 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 MIR136-201ENST00000385207 82 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 SNORA40-201ENST00000388090 126 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 JTBP1-201ENST00000441314 247 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 RNU6-830P-201ENST00000516353 107 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 SUMO2P16-201ENST00000519475 264 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 AP001328.1-201ENST00000528550 176 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 AL645939.4-201ENST00000604495 135 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 AL359821.1-201ENST00000605519 182 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 AC103810.8-201ENST00000607347 118 ntBASIC1.37□□□□□ -2.19
TIMP3P35625 SNORD18B-201ENST00000365659 72 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 RNU6-1189P-201ENST00000383958 107 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 MIR194-1-201ENST00000384892 85 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 Y_RNA.586-201ENST00000391146 98 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 RNU6-321P-201ENST00000410912 106 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 MTND4LP9-201ENST00000427694 174 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 AC087499.4-201ENST00000448505 178 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 AP001340.1-201ENST00000624405 217 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.36□□□□□ -2.19
TIMP3P35625 AC095038.3-201ENST00000634439 195 ntBASIC1.36□□□□□ -2.19
TIMP3P35625 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
TIMP3P35625 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 AL157777.2-201ENST00000258070 137 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 MIR337-201ENST00000362281 93 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 Y_RNA.52-201ENST00000362760 96 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 RNU6-915P-201ENST00000364943 103 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
TIMP3P35625 MIR1267-201ENST00000408723 78 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
TIMP3P35625 RNU4-57P-201ENST00000515980 135 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 TUG1_4.1-201ENST00000619464 181 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
TIMP3P35625 AC106754.2-201ENST00000623006 233 ntBASIC1.35□□□□□ -2.19
TIMP3P35625 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 MTND5P32-201ENST00000560711 1802 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 Y_RNA.120-201ENST00000363304 110 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 SNORA2.2-201ENST00000365473 135 ntBASIC1.34□□□□□ -2.19
TIMP3P35625 RNU6-81P-201ENST00000365608 104 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms